RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 RFESDQ8TAC1 157 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 TMEM126AQ9H061 195 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 IZUMO1RA6ND01 250 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 RBP4P02753 201 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 IFITM1P13164 125 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 RPL30P62888 115 aaKnown RBP12.5□□□□□ -0.41
FXN-201ENST00000377270 MIC13Q5XKP0 118 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 PQLC2Q6ZP29 291 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 AJUBAQ96IF1 538 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 COL25A1Q9BXS0 654 aaPredicted RBP12.5□□□□□ -0.41
FXN-201ENST00000377270 ENY2Q9NPA8 101 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 TIMM8BQ9Y5J9 83 aaPredicted RBP12.5□□□□□ -0.41
FXN-201ENST00000377270 F11RQ9Y624 299 aaKnown RBP12.5□□□□□ -0.41
FXN-201ENST00000377270 IGHV3-43A0A0B4J1X8 118 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 IGHV3-43DP0DP04 118 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 AREGP15514 252 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 OR13A1Q8NGR1 328 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 ATP6V0E2Q8NHE4 81 aa12.5□□□□□ -0.41
FXN-201ENST00000377270 SOX21Q9Y651 276 aaPredicted RBP12.5□□□□□ -0.41
FXN-201ENST00000377270 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
FXN-201ENST00000377270 NBEAQ8NFP9 2946 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 GAGE2BQ13066 116 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 GAGE2EQ4V326 116 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 TREML4Q6UXN2 200 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 CD177Q8N6Q3 437 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 GAGE2DQ9UEU5 116 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 DEFB108AA8MXU0 73 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 IGLL5B9A064 214 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 PRDX2P32119 198 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 MSMPQ1L6U9 139 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
FXN-201ENST00000377270 RPRMLQ8N4K4 120 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 DUX5Q96PT3 197 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 MGST2Q99735 147 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 DCTN5Q9BTE1 182 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 USF3Q68DE3 2245 aa12.49□□□□□ -0.41
FXN-201ENST00000377270 RP1L1Q8IWN7 2480 aaPredicted RBP12.49□□□□□ -0.41
FXN-201ENST00000377270 M0R1B8 84 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 LINC00694P0DN24 101 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 EDDM3AQ14507 147 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 BCL6BQ8N143 479 aaPredicted RBP12.48□□□□□ -0.41
FXN-201ENST00000377270 OR1L8Q8NGR8 309 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 SPANXA1Q9NS26 97 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 CADP27708 2225 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 MZT1Q08AG7 82 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
FXN-201ENST00000377270 IGFL3Q6UXB1 125 aa12.48□□□□□ -0.41
FXN-201ENST00000377270 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
FXN-201ENST00000377270 CHCHD1Q96BP2 118 aaKnown RBP12.48□□□□□ -0.41
FXN-201ENST00000377270 NHP2Q9NX24 153 aaKnown RBP12.48□□□□□ -0.41
FXN-201ENST00000377270 MGAQ8IWI9 3026 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 CSN1S1P47710 185 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 MFAP2P55001 183 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 RASL11AQ6T310 242 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 FAM215AQ9Y5M1 114 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 MAP1BP46821 2468 aaKnown RBP12.47□□□□□ -0.41
FXN-201ENST00000377270 F5H768 121 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 F8WDY8 70 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 LINC00205P59089 165 aa12.47□□□□□ -0.41
FXN-201ENST00000377270 EIF4EBP1Q13541 118 aaPredicted RBP12.47□□□□□ -0.41
FXN-201ENST00000377270 HSD17B10Q99714 261 aaKnown RBP12.47□□□□□ -0.41
FXN-201ENST00000377270 OR2J3O76001 311 aa12.46□□□□□ -0.41
FXN-201ENST00000377270 NCR2O95944 276 aa12.46□□□□□ -0.41
FXN-201ENST00000377270 OR5AL1P0C617 328 aa12.46□□□□□ -0.41
FXN-201ENST00000377270 BRWD1-AS2P59051 145 aa12.46□□□□□ -0.41
FXN-201ENST00000377270 FAM19A5Q7Z5A7 132 aaPredicted RBP12.46□□□□□ -0.41
FXN-201ENST00000377270 SPINT2O43291 252 aa12.46□□□□□ -0.42
FXN-201ENST00000377270 FOXA3P55318 350 aaPredicted RBP12.46□□□□□ -0.42
FXN-201ENST00000377270 EFNB3Q15768 340 aa12.46□□□□□ -0.42
FXN-201ENST00000377270 MRPL23Q16540 153 aaKnown RBP12.46□□□□□ -0.42
FXN-201ENST00000377270 Q6ZS92 163 aa12.46□□□□□ -0.42
FXN-201ENST00000377270 RBMXL3Q8N7X1 1067 aaKnown RBP12.46□□□□□ -0.42
FXN-201ENST00000377270 IGKV1D-17A0A075B6S4 117 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 IGHV3OR15-7A0A075B7D8 119 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 TEX50A0A1B0GTY4 177 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 K7EM74 188 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 MOSP00540 346 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 TCF15Q12870 199 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 SPRNQ5BIV9 151 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 PLPPR2Q96GM1 343 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 AKAP13Q12802 2813 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 HCFC1P51610 2035 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 DYSFO75923 2080 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 K7EMI3 77 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 TM4SF5O14894 197 aa12.45□□□□□ -0.42
FXN-201ENST00000377270 TMEM213A2RRL7 107 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 LINC00473A8K010 186 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 SRRM5B3KS81 715 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 C15orf65H3BRN8 121 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 KLK10O43240 276 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 CSN3P07498 182 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 GATA4P43694 442 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 PCP2Q8IVA1 136 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 SSMEM1Q8WWF3 244 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 SLC25A33Q9BSK2 321 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms