RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PIP4P1Q86T03 277 aa11.05□□□□□ -0.64
GPC6-201ENST00000377047 NTF4P34130 210 aa11.05□□□□□ -0.64
GPC6-201ENST00000377047 GATA4P43694 442 aa11.05□□□□□ -0.64
GPC6-201ENST00000377047 ACACAQ13085 2346 aa11.05□□□□□ -0.64
GPC6-201ENST00000377047 TTC32Q5I0X7 151 aa11.05□□□□□ -0.64
GPC6-201ENST00000377047 LYZL1Q6UWQ5 148 aa11.05□□□□□ -0.64
GPC6-201ENST00000377047 HEATR1Q9H583 2144 aaKnown RBP11.05□□□□□ -0.64
GPC6-201ENST00000377047 PROK2Q9HC23 129 aa11.05□□□□□ -0.64
GPC6-201ENST00000377047 TDGF1P3P51864 188 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 LAGE3Q14657 143 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 C1orf122Q6ZSJ8 110 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 A8MXK9 166 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 QRFPP83859 136 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 PSG3Q16557 428 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 S100A7L2Q5SY68 101 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 FOXL1Q12952 345 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 MLANAQ16655 118 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 RNASE2P10153 161 aaKnown RBP11.04□□□□□ -0.64
GPC6-201ENST00000377047 NIT1Q86X76 327 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 TMEM86BQ8N661 226 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 OR5A1Q8NGJ0 315 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 AGMATQ9BSE5 352 aa11.04□□□□□ -0.64
GPC6-201ENST00000377047 IGHV4-39P01824 125 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 TMEM14EPQ6UXP3 125 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 TYMSP04818 313 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 CFHR2P36980 270 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 ERCC8Q13216 396 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 GNB1LQ9BYB4 327 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 IGKCP01834 107 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 CD300EQ496F6 205 aaPredicted RBP11.03□□□□□ -0.64
GPC6-201ENST00000377047 Q8TCH9 128 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 AKAP6Q13023 2319 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 CACNA1DQ01668 2161 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 D6R8Y8 96 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 ATP5L2Q7Z4Y8 100 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 PRDM13Q9H4Q3 707 aa11.03□□□□□ -0.64
GPC6-201ENST00000377047 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.64
GPC6-201ENST00000377047 SFTA2Q6UW10 78 aa11.02□□□□□ -0.64
GPC6-201ENST00000377047 SRSF8Q9BRL6 282 aaKnown RBP11.02□□□□□ -0.64
GPC6-201ENST00000377047 DMRT1Q9Y5R6 373 aa11.02□□□□□ -0.64
GPC6-201ENST00000377047 DUX4L9Q6RFH8 374 aaPredicted RBP11.02□□□□□ -0.65
GPC6-201ENST00000377047 ZNF562Q6V9R5 426 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 A0A1W2PPI3 338 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 GHRHP01286 108 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 PAX2Q02962 417 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 PHLDA1Q8WV24 401 aaPredicted RBP11.02□□□□□ -0.65
GPC6-201ENST00000377047 LSM4Q9Y4Z0 139 aaKnown RBP11.02□□□□□ -0.65
GPC6-201ENST00000377047 DOCK8Q8NF50 2099 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 G3V318 75 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 NPC2P61916 151 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 Q6ZR03 302 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 C14orf178Q8N769 122 aaPredicted RBP11.02□□□□□ -0.65
GPC6-201ENST00000377047 XCL2Q9UBD3 114 aa11.02□□□□□ -0.65
GPC6-201ENST00000377047 C15orf62A8K5M9 175 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 J3QLI3 93 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 GBF1Q92538 1859 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 RFNGQ9Y644 331 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 ATRAIDQ6UW56 229 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 TMEM190Q8WZ59 177 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 A0A087WWL8 130 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 PLNP26678 52 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 WDR81Q562E7 1941 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 TRAV8-1A0A0A6YYK1 113 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 IFI27L1Q96BM0 104 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 REG4Q9BYZ8 158 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 POLEQ07864 2286 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
GPC6-201ENST00000377047 CLDN16Q9Y5I7 305 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 FAM215AQ9Y5M1 114 aa11.01□□□□□ -0.65
GPC6-201ENST00000377047 CFHR3Q02985 330 aa11□□□□□ -0.65
GPC6-201ENST00000377047 FRMPD3Q5JV73 1810 aa11□□□□□ -0.65
GPC6-201ENST00000377047 PRB1P04280 392 aa11□□□□□ -0.65
GPC6-201ENST00000377047 TCF15Q12870 199 aa11□□□□□ -0.65
GPC6-201ENST00000377047 TP53BP1Q12888 1972 aaPredicted RBP11□□□□□ -0.65
GPC6-201ENST00000377047 A0A0G2JRQ6 117 aa11□□□□□ -0.65
GPC6-201ENST00000377047 MORN3Q6PF18 240 aaPredicted RBP11□□□□□ -0.65
GPC6-201ENST00000377047 TEX43Q6ZNM6 134 aa11□□□□□ -0.65
GPC6-201ENST00000377047 Q6ZS49 121 aa11□□□□□ -0.65
GPC6-201ENST00000377047 C10orf126Q8N4M7 172 aa11□□□□□ -0.65
GPC6-201ENST00000377047 RPP25LQ8N5L8 163 aaKnown RBP11□□□□□ -0.65
GPC6-201ENST00000377047 C1orf159Q96HA4 380 aa11□□□□□ -0.65
GPC6-201ENST00000377047 TANC1Q9C0D5 1861 aa11□□□□□ -0.65
GPC6-201ENST00000377047 NDUFB8O95169 186 aa11□□□□□ -0.65
GPC6-201ENST00000377047 FANCMQ8IYD8 2048 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 FGF16O43320 207 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 LYPD1Q8N2G4 141 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 CSTL1Q9H114 145 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 NHP2Q9NX24 153 aaKnown RBP10.99□□□□□ -0.65
GPC6-201ENST00000377047 ZNF503-AS2A6NEH8 195 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 F5H768 121 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
GPC6-201ENST00000377047 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 JPT2Q9H910 190 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 MPDZO75970 2070 aa10.99□□□□□ -0.65
GPC6-201ENST00000377047 FHL1Q13642 323 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms