RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TMEM68Q96MH6 324 aa9.75□□□□□ -0.85
CLCN6-206ENST00000376496 M0QZK8 103 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 AP4M1O00189 453 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 ISLRO14498 428 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 TGOLN2O43493 480 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 TSPAN9O75954 239 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 MT-ND4LP03901 98 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 MYCNOSP40205 109 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 STXBP6Q8NFX7 210 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 TUBA4BQ9H853 241 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 NF1P21359 2839 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 H7BYZ3 331 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 CLDN34H7C241 214 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 PEX7O00628 323 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 RAB5AP20339 215 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 GNG4P50150 75 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 CRIP2P52943 208 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-206ENST00000376496 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 VPREB3Q9UKI3 123 aa9.74□□□□□ -0.85
CLCN6-206ENST00000376496 TRAV8-1A0A0A6YYK1 113 aa9.73□□□□□ -0.85
CLCN6-206ENST00000376496 HIST1H1EP10412 219 aaKnown RBP9.73□□□□□ -0.85
CLCN6-206ENST00000376496 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
CLCN6-206ENST00000376496 TXN2Q99757 166 aa9.73□□□□□ -0.85
CLCN6-206ENST00000376496 ARL2-SNX15V9GYD0 113 aa9.73□□□□□ -0.85
CLCN6-206ENST00000376496 MRPS12O15235 138 aaKnown RBP9.73□□□□□ -0.85
CLCN6-206ENST00000376496 MGST1P10620 155 aaKnown RBP9.73□□□□□ -0.85
CLCN6-206ENST00000376496 FAM3BP58499 235 aaPredicted RBP9.73□□□□□ -0.85
CLCN6-206ENST00000376496 SMR3AQ99954 134 aa9.73□□□□□ -0.85
CLCN6-206ENST00000376496 RABAC1Q9UI14 185 aa9.73□□□□□ -0.85
CLCN6-206ENST00000376496 EPDR1Q9UM22 224 aa9.73□□□□□ -0.85
CLCN6-206ENST00000376496 LOC105371267A0A1B0GV96 52 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 M0R3E3 92 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 IGLC2P0DOY2 106 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 RPS10P46783 165 aaKnown RBP9.72□□□□□ -0.85
CLCN6-206ENST00000376496 KRTAP1-1Q07627 177 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 KLK9Q2XQG4 91 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 RNASE7Q9H1E1 156 aaKnown RBP9.72□□□□□ -0.85
CLCN6-206ENST00000376496 MLXQ9UH92 298 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 KLK9Q9UKQ9 250 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 TRBV7-1A0A0A6YYK4 115 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 CLPSL1A2RUU4 121 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 IGLV2-8P01709 118 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 ARL3P36405 182 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 GALR1P47211 349 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 C1QL4Q86Z23 238 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 OR8I2Q8N0Y5 310 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 OR4F17Q8NGA8 305 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 SFRP2Q96HF1 295 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 TMEM14CQ9P0S9 112 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 UNQ9165/PRO28630Q6UXU0 137 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 C9orf139Q6ZV77 190 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 IGF2BP2-AS1Q96M15 143 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 SMAD5-AS1Q9Y6J3 95 aa9.72□□□□□ -0.85
CLCN6-206ENST00000376496 SETD2Q9BYW2 2564 aaPredicted RBP9.71□□□□□ -0.85
CLCN6-206ENST00000376496 FAM223BA6NKX1 122 aa9.71□□□□□ -0.85
CLCN6-206ENST00000376496 NDUFS6O75380 124 aaKnown RBP9.71□□□□□ -0.85
CLCN6-206ENST00000376496 HLA-DMBP28068 263 aa9.71□□□□□ -0.85
CLCN6-206ENST00000376496 RAB9AP51151 201 aa9.71□□□□□ -0.85
CLCN6-206ENST00000376496 TEX38Q6PEX7 206 aa9.71□□□□□ -0.85
CLCN6-206ENST00000376496 FAM223AQ8IWN6 122 aa9.71□□□□□ -0.85
CLCN6-206ENST00000376496 YAE1D1Q9NRH1 226 aa9.71□□□□□ -0.85
CLCN6-206ENST00000376496 A0A1W2PPQ1 181 aa9.71□□□□□ -0.86
CLCN6-206ENST00000376496 BMPR1BO00238 502 aa9.71□□□□□ -0.86
CLCN6-206ENST00000376496 CNN1P51911 297 aaKnown RBP9.71□□□□□ -0.86
CLCN6-206ENST00000376496 CFHR3Q02985 330 aa9.71□□□□□ -0.86
CLCN6-206ENST00000376496 PRR27Q6MZM9 219 aa9.71□□□□□ -0.86
CLCN6-206ENST00000376496 OR4X2Q8NGF9 303 aa9.71□□□□□ -0.86
CLCN6-206ENST00000376496 OR5R1Q8NH85 324 aa9.71□□□□□ -0.86
CLCN6-206ENST00000376496 C9JCJ5 164 aa9.7□□□□□ -0.86
CLCN6-206ENST00000376496 IGLV1-40P01703 118 aa9.7□□□□□ -0.86
CLCN6-206ENST00000376496 SRP14P37108 136 aaKnown RBP9.7□□□□□ -0.86
CLCN6-206ENST00000376496 GOLT1AQ6ZVE7 132 aa9.7□□□□□ -0.86
CLCN6-206ENST00000376496 SCGB2A1O75556 95 aa9.7□□□□□ -0.86
CLCN6-206ENST00000376496 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
CLCN6-206ENST00000376496 ERVFC1-1P60608 527 aa9.7□□□□□ -0.86
CLCN6-206ENST00000376496 SIGLEC15Q6ZMC9 328 aa9.7□□□□□ -0.86
CLCN6-206ENST00000376496 CTDSP1Q9GZU7 261 aa9.7□□□□□ -0.86
CLCN6-206ENST00000376496 ZNF702PQ9H963 129 aa9.7□□□□□ -0.86
CLCN6-206ENST00000376496 TCRAP04437 139 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 EDN2P20800 178 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 BAGE2Q86Y30 109 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 OR10G8Q8NGN5 311 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 FAM210BQ96KR6 192 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 FOXC2Q99958 501 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 TMEM242Q9NWH2 141 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 ZNF320A2RRD8 509 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 CXorf65A6NEN9 183 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 CA1P00915 261 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-206ENST00000376496 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
CLCN6-206ENST00000376496 C5orf17Q8NAS9 161 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 UBE2G1P62253 170 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 OTORQ9NRC9 128 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 CDC42EP3Q9UKI2 254 aa9.69□□□□□ -0.86
CLCN6-206ENST00000376496 BUB3O43684 328 aa9.68□□□□□ -0.86
CLCN6-206ENST00000376496 ANAPC16Q96DE5 110 aa9.68□□□□□ -0.86
CLCN6-206ENST00000376496 ATG101Q9BSB4 218 aa9.68□□□□□ -0.86
CLCN6-206ENST00000376496 ZNF705FA8MVS1 300 aaPredicted RBP9.68□□□□□ -0.86
CLCN6-206ENST00000376496 TCL1AP56279 114 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms