RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MBD3L3A6NE82 208 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 MBD3L5A6NJ08 208 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 SMKR1H3BMG3 65 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 Q0VG73 95 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 RIGQ13278 110 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 OR10J3Q5JRS4 329 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 MBD3L2Q8NHZ7 208 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TIMD4Q96H15 378 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 C1orf159Q96HA4 380 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 C20orf144Q9BQM9 153 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TIMM23O14925 209 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 LINC00614P0C842 121 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 SCNM1Q9BWG6 230 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 KLK15Q9H2R5 256 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TMEM178BH3BS89 294 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 SP5Q6BEB4 398 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 EBLN2Q6P2I7 272 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 COL12A1Q99715 3063 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TCRAP04437 139 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 CKS2P33552 79 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TEX43Q6ZNM6 134 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TMEM133Q9H2Q1 129 aa11.57□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 OR2T8A6NH00 312 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 ARMS2P0C7Q2 107 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 IGHV1-8P0DP01 117 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 RBPMS2Q6ZRY4 209 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 C11orf52Q96A22 123 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 LINC00527Q9UJ94 153 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 A0A1B0GUT8 65 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TMEM189A5PLL7 270 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 NPIPB5A8MRT5 1133 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 LGALS7P47929 136 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 DNLZQ5SXM8 178 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TEX45Q8NA69 505 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 FAM57AQ8TBR7 257 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 NOTCH2Q04721 2471 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 LINC00310P59036 64 aa11.56□□□□□ -0.56
TNFRSF1B-201ENST00000376259 IGKV2-40A0A087WW87 121 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 CCL21O00585 134 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 IGKV2D-40P01614 121 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TMEM167AQ8TBQ9 72 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 CTSZQ9UBR2 303 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 CCDC168Q8NDH2 2452 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TMPRSS3P57727 454 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 RELQ04864 619 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 SONP18583 2426 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 PRSS46E5RG02 174 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 PLA2G2CQ5R387 149 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 FAM162BQ5T6X4 162 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 HSPB8Q9UJY1 196 aa11.55□□□□□ -0.56
TNFRSF1B-201ENST00000376259 HLA-DRB1P01911 266 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 FXYD5Q96DB9 178 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 SLC25A39Q9BZJ4 359 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 USP9XQ93008 2570 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 IGHV2-26A0A0B4J1V2 119 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 OR4A5Q8NH83 315 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 ZFP30Q9Y2G7 519 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 C22orf46C9J442 243 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 EVI2AP22794 236 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 CFHR2P36980 270 aa11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 LINC00322Q6ZN03 302 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 ALKBH7Q9BT30 221 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1B-201ENST00000376259 MEF2CQ06413 473 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 LDLRAD2Q5SZI1 272 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 GDF5OSQ5U4N7 250 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 THYN1Q9P016 225 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 SMG1Q96Q15 3661 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 RUSC1-AS1Q66K80 236 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 AMMECR1LQ6DCA0 310 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 NDFIP1Q9BT67 221 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 IGLV3-9A0A075B6K5 115 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 LHBP01229 141 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 OR5AN1Q8NGI8 311 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 PSG8Q9UQ74 426 aa11.53□□□□□ -0.56
TNFRSF1B-201ENST00000376259 NACAE9PAV3 2078 aa11.52□□□□□ -0.56
TNFRSF1B-201ENST00000376259 IGHV1-3A0A0C4DH29 117 aa11.52□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TMEM213A2RRL7 107 aa11.52□□□□□ -0.56
TNFRSF1B-201ENST00000376259 LOXP28300 417 aaPredicted RBP11.52□□□□□ -0.56
TNFRSF1B-201ENST00000376259 RELNP78509 3460 aa11.52□□□□□ -0.57
TNFRSF1B-201ENST00000376259 SMIM27A0A1W2PRY6 76 aa11.52□□□□□ -0.57
TNFRSF1B-201ENST00000376259 LIPFP07098 398 aa11.52□□□□□ -0.57
TNFRSF1B-201ENST00000376259 ASCL5Q7RTU5 278 aa11.52□□□□□ -0.57
TNFRSF1B-201ENST00000376259 AMN1Q8IY45 258 aa11.52□□□□□ -0.57
TNFRSF1B-201ENST00000376259 UBTD1Q9HAC8 227 aa11.52□□□□□ -0.57
TNFRSF1B-201ENST00000376259 E7EQL1 145 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 GCSHP23434 173 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 GPR183P32249 361 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 CACNG7P62955 275 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 FBLN7Q53RD9 439 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 TMEM75Q8N9X5 138 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 RNF125Q96EQ8 232 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 LY96Q9Y6Y9 160 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 ADAMTS20P59510 1910 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 C7orf71A4D174 169 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 IGLV2-8P01709 118 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms