RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 TMEM86BQ8N661 226 aa12.03□□□□□ -0.48
NOTCH4-201ENST00000375023 C22orf46C9J442 243 aa12.03□□□□□ -0.48
NOTCH4-201ENST00000375023 TMEM170AQ8WVE7 144 aa12.03□□□□□ -0.48
NOTCH4-201ENST00000375023 GGTLC1Q9BX51 225 aa12.03□□□□□ -0.48
NOTCH4-201ENST00000375023 CSTL1Q9H114 145 aa12.03□□□□□ -0.48
NOTCH4-201ENST00000375023 PLNP26678 52 aa12.03□□□□□ -0.48
NOTCH4-201ENST00000375023 LINC00271P0C7V0 271 aa12.02□□□□□ -0.48
NOTCH4-201ENST00000375023 A0A1W2PRE2 83 aa12.02□□□□□ -0.48
NOTCH4-201ENST00000375023 OVOL1O14753 267 aa12.02□□□□□ -0.48
NOTCH4-201ENST00000375023 LINC00473A8K010 186 aa12.02□□□□□ -0.49
NOTCH4-201ENST00000375023 SPXQ9BT56 116 aa12.02□□□□□ -0.49
NOTCH4-201ENST00000375023 GTF3C1Q12789 2109 aa12.02□□□□□ -0.49
NOTCH4-201ENST00000375023 C5orf30Q96GV9 206 aa12.02□□□□□ -0.49
NOTCH4-201ENST00000375023 XCL2Q9UBD3 114 aa12.02□□□□□ -0.49
NOTCH4-201ENST00000375023 TOMM40O96008 361 aa12.02□□□□□ -0.49
NOTCH4-201ENST00000375023 LCN12Q6JVE5 192 aa12.02□□□□□ -0.49
NOTCH4-201ENST00000375023 KLK9Q9UKQ9 250 aa12.02□□□□□ -0.49
NOTCH4-201ENST00000375023 SSBP2P81877 361 aaPredicted RBP12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 NABP1Q96AH0 204 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 A0A1B0GW15 77 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 NTN3O00634 580 aaPredicted RBP12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 RPRMLQ8N4K4 120 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 GAFA1Q96PS6 74 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 BUB1B-PAK6H3BSN5 160 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 SAA4P35542 130 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 NEUROG3Q9Y4Z2 214 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 ORMDL2Q53FV1 153 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 TEX38Q6PEX7 206 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 A0A087X0K7 114 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 C6orf226Q5I0X4 101 aa12.01□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BKO60814 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BJP06899 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BOP23527 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BBP33778 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BDP58876 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BCP62807 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST2H2BEQ16778 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST2H2BFQ5QNW6 126 aaPredicted RBP12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST2H2BCQ6DN03 193 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BHQ93079 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 LINC00479Q96M42 142 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BNQ99877 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 HIST1H2BMQ99879 126 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 WISP1O95388 367 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 CRYGSP22914 178 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 RNF166Q96A37 237 aaPredicted RBP12□□□□□ -0.49
NOTCH4-201ENST00000375023 LRRK1Q38SD2 2015 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 SPTBN2O15020 2390 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 H0YJW9 148 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 TSKUQ8WUA8 353 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 PLSCR4Q9NRQ2 329 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 LRCOL1A6NCL2 159 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 OVOL3O00110 214 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 ERG28Q9UKR5 140 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 A0A087WWC5 75 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 DEFB131AP59861 70 aa12□□□□□ -0.49
NOTCH4-201ENST00000375023 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 SAMD5Q5TGI4 173 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 ANAPC13Q9BS18 74 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 TRAV8-3A0A0A6YYJ7 113 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 A0A0J9YY99 117 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 ZFP36P26651 326 aaKnown RBP11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 NTF4P34130 210 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 ORAOV1Q8WV07 137 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 IGFBPL1Q8WX77 278 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 OSTCQ9NRP0 149 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 TEX43Q6ZNM6 134 aa11.99□□□□□ -0.49
NOTCH4-201ENST00000375023 TRAV9-2A0A087WT02 112 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 RPL36AP83881 106 aaKnown RBP11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 RPL36ALQ969Q0 106 aaKnown RBP11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 ADAMTS7Q9UKP4 1686 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 IGKV1-16P04430 117 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 ZNF479Q96JC4 524 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 RHPN1-AS1Q9BWJ2 59 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 F8WEM9 126 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 ARFGEF3Q5TH69 2177 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 DOCK8Q8NF50 2099 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 SRRM5B3KS81 715 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 SUMO4Q6EEV6 95 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 SLC25A48Q6ZT89 311 aaKnown RBP11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 C8orf49Q96NF6 230 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 F2Z2F3 143 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 GLRX5Q86SX6 157 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 PRSS33Q8NF86 280 aa11.98□□□□□ -0.49
NOTCH4-201ENST00000375023 IGKV1OR2-108A0A075B7D4 117 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 IGKV1D-17A0A075B6S4 117 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 TRAV12-2A0A075B6T6 113 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 IGKV1-5P01602 117 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 SPINK13Q1W4C9 94 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 SPSB3Q6PJ21 355 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 OCIAD2Q56VL3 154 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 AMN1Q8IY45 258 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 NUP35Q8NFH5 326 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 TMEM158Q8WZ71 300 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 PAX9P55771 341 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 C5orf64Q2M2E5 130 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 AGMATQ9BSE5 352 aa11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 RSPO3Q9BXY4 272 aaPredicted RBP11.97□□□□□ -0.49
NOTCH4-201ENST00000375023 GAGE12JA6NER3 117 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms