RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 PSMG3Q9BT73 122 aaPredicted RBP11.22□□□□□ -0.61
HSPG2-201ENST00000374673 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 NOTCH1P46531 2555 aa11.22□□□□□ -0.61
HSPG2-201ENST00000374673 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 K7EQG2 157 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 JTBO76095 146 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.61
HSPG2-201ENST00000374673 ATP6V0CP27449 155 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 GALR1P47211 349 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 TFPI2P48307 235 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 GCSAMLQ5JQS6 135 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 FFAR4Q5NUL3 377 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 MRAPQ8TCY5 172 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 HYLS1Q96M11 299 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 ARPC5LQ9BPX5 153 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 CYTL1Q9NRR1 136 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 C19orf73Q9NVV2 129 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 SMAD5-AS1Q9Y6J3 95 aa11.21□□□□□ -0.61
HSPG2-201ENST00000374673 CMC4P56277 68 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-201ENST00000374673 CD300CQ08708 224 aa11.2□□□□□ -0.62
HSPG2-201ENST00000374673 ODF3L2Q3SX64 289 aa11.2□□□□□ -0.62
HSPG2-201ENST00000374673 WFDC3Q8IUB2 231 aa11.2□□□□□ -0.62
HSPG2-201ENST00000374673 OR2G3Q8NGZ4 309 aa11.2□□□□□ -0.62
HSPG2-201ENST00000374673 MRPL32Q9BYC8 188 aaKnown RBP11.2□□□□□ -0.62
HSPG2-201ENST00000374673 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
HSPG2-201ENST00000374673 A8MZ25 164 aa11.19□□□□□ -0.62
HSPG2-201ENST00000374673 MRPS12O15235 138 aaKnown RBP11.19□□□□□ -0.62
HSPG2-201ENST00000374673 BCL2L11O43521 198 aa11.19□□□□□ -0.62
HSPG2-201ENST00000374673 MEOX2P50222 304 aa11.19□□□□□ -0.62
HSPG2-201ENST00000374673 FAM78BQ5VT40 261 aa11.19□□□□□ -0.62
HSPG2-201ENST00000374673 BPIFA4PQ86YQ2 179 aa11.19□□□□□ -0.62
HSPG2-201ENST00000374673 GNPNAT1Q96EK6 184 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-201ENST00000374673 SEPSECSQ9HD40 501 aaKnown RBP11.19□□□□□ -0.62
HSPG2-201ENST00000374673 A0A087X0K7 114 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 KANTRA0A1W2PQU2 76 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 OR11H12B2RN74 326 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 SOCS3O14543 225 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 M6PRP20645 277 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 SERF2P84101 59 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 ACOT6Q3I5F7 207 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-201ENST00000374673 LGALSLQ3ZCW2 172 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-201ENST00000374673 SAMD13Q5VXD3 122 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 TMUB2Q71RG4 321 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 FAM24BQ8N5W8 94 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 C17orf77Q96MU5 243 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 WFDC10AQ9H1F0 79 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 MAP6D1Q9H9H5 199 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 UBQLN2Q9UHD9 624 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 FUT9Q9Y231 359 aa11.18□□□□□ -0.62
HSPG2-201ENST00000374673 FBN3Q75N90 2809 aa11.17□□□□□ -0.62
HSPG2-201ENST00000374673 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
HSPG2-201ENST00000374673 IGHV4-30-4P0DP06 118 aa11.17□□□□□ -0.62
HSPG2-201ENST00000374673 ATF4P18848 351 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-201ENST00000374673 ZFP69Q49AA0 526 aa11.17□□□□□ -0.62
HSPG2-201ENST00000374673 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
HSPG2-201ENST00000374673 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.17□□□□□ -0.62
HSPG2-201ENST00000374673 SH3BGRL3Q9H299 93 aa11.17□□□□□ -0.62
HSPG2-201ENST00000374673 PFDN1O60925 122 aa11.16□□□□□ -0.62
HSPG2-201ENST00000374673 RHOBP62745 196 aa11.16□□□□□ -0.62
HSPG2-201ENST00000374673 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
HSPG2-201ENST00000374673 MIR17HGQ75NE6 70 aa11.16□□□□□ -0.62
HSPG2-201ENST00000374673 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
HSPG2-201ENST00000374673 ZNF471Q9BX82 626 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-201ENST00000374673 SLC25A2Q9BXI2 301 aa11.16□□□□□ -0.62
HSPG2-201ENST00000374673 TMEM14CQ9P0S9 112 aa11.16□□□□□ -0.62
HSPG2-201ENST00000374673 ISLRO14498 428 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 MBP02144 154 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 ZNF688P0C7X2 276 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 IGLC2P0DOY2 106 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 SPP1P10451 314 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 ID1P41134 155 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 PSMB3P49720 205 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 DEFB131AP59861 70 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 RAB2AP61019 212 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 SNRPD3P62318 126 aaKnown RBP11.15□□□□□ -0.62
HSPG2-201ENST00000374673 EIF5AP63241 154 aaKnown RBP11.15□□□□□ -0.62
HSPG2-201ENST00000374673 FAM167A-AS1Q96KT0 104 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 CITED4Q96RK1 184 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 SRD5A3Q9H8P0 318 aa11.15□□□□□ -0.62
HSPG2-201ENST00000374673 LCN15Q6UWW0 184 aa11.14□□□□□ -0.63
HSPG2-201ENST00000374673 C9orf62Q8N4C0 152 aa11.14□□□□□ -0.63
HSPG2-201ENST00000374673 OR10G4Q8NGN3 311 aa11.14□□□□□ -0.63
HSPG2-201ENST00000374673 OR10G9Q8NGN4 311 aa11.14□□□□□ -0.63
HSPG2-201ENST00000374673 OR10G7Q8NGN6 311 aa11.14□□□□□ -0.63
HSPG2-201ENST00000374673 C16orf92Q96LL3 132 aa11.14□□□□□ -0.63
HSPG2-201ENST00000374673 HRH4Q9H3N8 390 aa11.14□□□□□ -0.63
HSPG2-201ENST00000374673 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
HSPG2-201ENST00000374673 A0A1W2PPV4 95 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 HIST1H1EP10412 219 aaKnown RBP11.13□□□□□ -0.63
HSPG2-201ENST00000374673 TAS2R45P59539 299 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 GUK1Q16774 197 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 TMEM41BQ5BJD5 291 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 FAM122CQ6P4D5 195 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 LINC00322Q6ZN03 302 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-201ENST00000374673 APRG1Q8IVJ8 170 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 STOML3Q8TAV4 291 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms