RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 NPIPB3Q92617 1050 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 SGK494Q96LW2 274 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 FNDC4Q9H6D8 234 aaPredicted RBP13.47□□□□□ -0.25
PHF1-202ENST00000374516 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
PHF1-202ENST00000374516 C1RLQ9NZP8 487 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 TP73-AS1Q9UF72 201 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 EPDR1Q9UM22 224 aa13.47□□□□□ -0.25
PHF1-202ENST00000374516 CACNA1BQ00975 2339 aa13.46□□□□□ -0.25
PHF1-202ENST00000374516 TRAV30A0A087WSZ9 112 aa13.46□□□□□ -0.25
PHF1-202ENST00000374516 BUB1B-PAK6H3BSN5 160 aa13.46□□□□□ -0.25
PHF1-202ENST00000374516 HBBP68871 147 aa13.46□□□□□ -0.25
PHF1-202ENST00000374516 ARL6IP6Q8N6S5 226 aa13.46□□□□□ -0.25
PHF1-202ENST00000374516 INSIG2Q9Y5U4 225 aa13.46□□□□□ -0.25
PHF1-202ENST00000374516 MAP1AP78559 2803 aaPredicted RBP13.46□□□□□ -0.25
PHF1-202ENST00000374516 TCRBV4S1A1TA0A5B7 111 aa13.46□□□□□ -0.26
PHF1-202ENST00000374516 SYS1-DBNDD2H3BUS1 97 aa13.46□□□□□ -0.26
PHF1-202ENST00000374516 M0QZ24 198 aa13.46□□□□□ -0.26
PHF1-202ENST00000374516 CD24P25063 80 aa13.46□□□□□ -0.26
PHF1-202ENST00000374516 CNTFRP26992 372 aa13.46□□□□□ -0.26
PHF1-202ENST00000374516 MC5RP33032 325 aa13.46□□□□□ -0.26
PHF1-202ENST00000374516 FOXA3P55318 350 aaPredicted RBP13.46□□□□□ -0.26
PHF1-202ENST00000374516 DTX2Q86UW9 622 aa13.46□□□□□ -0.26
PHF1-202ENST00000374516 TMEM167AQ8TBQ9 72 aa13.46□□□□□ -0.26
PHF1-202ENST00000374516 IGKV1D-37A0A075B6S9 117 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 IGHV3-48P01763 117 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 LIPFP07098 398 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 BPIFB3P59826 476 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 LINC00173Q6ZV60 143 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 CHCHD1Q96BP2 118 aaKnown RBP13.45□□□□□ -0.26
PHF1-202ENST00000374516 GPR82Q96P67 336 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 KLF12Q9Y4X4 402 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 IGHV1-24A0A0C4DH33 117 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 CGB1A6NKQ9 187 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 INS-IGF2F8WCM5 200 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 LINC00322Q6ZN03 302 aaPredicted RBP13.45□□□□□ -0.26
PHF1-202ENST00000374516 LINC00305Q7Z4B0 112 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 VSTM2AQ8TAG5 236 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 IGFBPL1Q8WX77 278 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 SMIM12Q96EX1 92 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 MLST8Q9BVC4 326 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 PRSS22Q9GZN4 317 aa13.45□□□□□ -0.26
PHF1-202ENST00000374516 UTP20O75691 2785 aaKnown RBP13.44□□□□□ -0.26
PHF1-202ENST00000374516 IGHV1-3A0A0C4DH29 117 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 hDV102S1A0JD36 115 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 PGPA6NDG6 321 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 LEPROTL1O95214 131 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 NUDT3O95989 172 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
PHF1-202ENST00000374516 WT1-ASQ06250 92 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 C8orf46Q8TAG6 207 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 GTSF1Q8WW33 167 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 TNFRSF14Q92956 283 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 RPP21Q9H633 154 aaKnown RBP13.44□□□□□ -0.26
PHF1-202ENST00000374516 WNK2Q9Y3S1 2297 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 A8MWL6 223 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 MOSP00540 346 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 RHOGP84095 191 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 LY6G5BQ8NDX9 201 aa13.44□□□□□ -0.26
PHF1-202ENST00000374516 TAX1BP3O14907 124 aa13.43□□□□□ -0.26
PHF1-202ENST00000374516 APELAP0DMC3 54 aa13.43□□□□□ -0.26
PHF1-202ENST00000374516 VMA21Q3ZAQ7 101 aa13.43□□□□□ -0.26
PHF1-202ENST00000374516 LDLRAD2Q5SZI1 272 aa13.43□□□□□ -0.26
PHF1-202ENST00000374516 ERASQ7Z444 233 aa13.43□□□□□ -0.26
PHF1-202ENST00000374516 BLNKQ8WV28 456 aa13.43□□□□□ -0.26
PHF1-202ENST00000374516 RPEQ96AT9 228 aa13.43□□□□□ -0.26
PHF1-202ENST00000374516 MYO18BQ8IUG5 2567 aa13.43□□□□□ -0.26
PHF1-202ENST00000374516 MRGPRG-AS1Q2M3A8 158 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 BVES-AS1Q5T3Y7 98 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 SLC25A34Q6PIV7 304 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 THAP8Q8NA92 274 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 PGLYRP4Q96LB8 373 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 MRPL36Q9P0J6 103 aaKnown RBP13.42□□□□□ -0.26
PHF1-202ENST00000374516 USP9XQ93008 2570 aaPredicted RBP13.42□□□□□ -0.26
PHF1-202ENST00000374516 A0A1W2PRD5 423 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 A0A1W2PRF3 423 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 A0A1W2PRM7 423 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 STXBP6Q8NFX7 210 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 SOX21Q9Y651 276 aaPredicted RBP13.42□□□□□ -0.26
PHF1-202ENST00000374516 USP24Q9UPU5 2620 aa13.42□□□□□ -0.26
PHF1-202ENST00000374516 RBP4P02753 201 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 LGALS7P47929 136 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 KLRD1Q13241 179 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 COTL1Q14019 142 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 RNF151Q2KHN1 245 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 CT83Q5H943 113 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 RPH3ALQ9UNE2 315 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 C19orf71A6NCJ1 209 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 P01737 135 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 ORM2P19652 201 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 SUB1P53999 127 aaKnown RBP eCLIP13.41□□□□□ -0.26
PHF1-202ENST00000374516 CRYBG3Q68DQ2 2970 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 DEFB125Q8N687 156 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 TMEM191AQ9H0A3 160 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 HILPDAQ9Y5L2 63 aa13.41□□□□□ -0.26
PHF1-202ENST00000374516 HSBP1L1C9JCN9 74 aa13.4□□□□□ -0.26
PHF1-202ENST00000374516 NBEAP1P0C6P0 100 aa13.4□□□□□ -0.26
PHF1-202ENST00000374516 LHFPL4Q7Z7J7 247 aa13.4□□□□□ -0.26
PHF1-202ENST00000374516 NDFIP1Q9BT67 221 aa13.4□□□□□ -0.26
PHF1-202ENST00000374516 A0A1W2PPI3 338 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms