RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 UHRF2Q96PU4 802 aa13.47□□□□□ -0.25
C9orf43-202ENST00000374165 PFDN5Q99471 154 aa13.47□□□□□ -0.25
C9orf43-202ENST00000374165 TECRQ9NZ01 308 aaKnown RBP13.47□□□□□ -0.25
C9orf43-202ENST00000374165 COX7A2P2O60397 106 aa13.47□□□□□ -0.25
C9orf43-202ENST00000374165 YPEL3P61236 119 aaPredicted RBP13.47□□□□□ -0.25
C9orf43-202ENST00000374165 C4orf3Q8WVX3 66 aa13.47□□□□□ -0.25
C9orf43-202ENST00000374165 MRPL32Q9BYC8 188 aaKnown RBP13.47□□□□□ -0.25
C9orf43-202ENST00000374165 RPS10P5Q9NQ39 176 aa13.47□□□□□ -0.25
C9orf43-202ENST00000374165 C10orf113Q5VZT2 155 aa13.46□□□□□ -0.25
C9orf43-202ENST00000374165 UNQ9165/PRO28630Q6UXU0 137 aa13.46□□□□□ -0.25
C9orf43-202ENST00000374165 OR1L4Q8NGR5 311 aa13.46□□□□□ -0.25
C9orf43-202ENST00000374165 ATP6V0BQ99437 205 aa13.46□□□□□ -0.25
C9orf43-202ENST00000374165 GAR1Q9NY12 217 aaKnown RBP13.46□□□□□ -0.25
C9orf43-202ENST00000374165 TSSC4Q9Y5U2 329 aaPredicted RBP13.46□□□□□ -0.25
C9orf43-202ENST00000374165 TRAV5A0A0B4J249 113 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 OR7C2O60412 319 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 NDUFS6O75380 124 aaKnown RBP13.46□□□□□ -0.26
C9orf43-202ENST00000374165 TOMM40O96008 361 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 C8orf88P0DMB2 117 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 ORM2P19652 201 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 TAS2R45P59539 299 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 PQLC2Q6ZP29 291 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 RNF2Q99496 336 aa13.46□□□□□ -0.26
C9orf43-202ENST00000374165 YTHDF2Q9Y5A9 579 aaKnown RBP13.46□□□□□ -0.26
C9orf43-202ENST00000374165 TSPAN4O14817 238 aa13.45□□□□□ -0.26
C9orf43-202ENST00000374165 RHEBQ15382 184 aa13.45□□□□□ -0.26
C9orf43-202ENST00000374165 TOMM20LQ6UXN7 152 aa13.45□□□□□ -0.26
C9orf43-202ENST00000374165 OR11H1Q8NG94 326 aa13.45□□□□□ -0.26
C9orf43-202ENST00000374165 RPUSD4Q96CM3 377 aaKnown RBP13.45□□□□□ -0.26
C9orf43-202ENST00000374165 TVP23CQ96ET8 276 aa13.45□□□□□ -0.26
C9orf43-202ENST00000374165 FAM167A-AS1Q96KT0 104 aa13.45□□□□□ -0.26
C9orf43-202ENST00000374165 SLC25A2Q9BXI2 301 aa13.45□□□□□ -0.26
C9orf43-202ENST00000374165 ZNF727A8MUV8 499 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 IL4P05112 153 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 NPPCP23582 126 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 USF2Q15853 346 aaPredicted RBP13.44□□□□□ -0.26
C9orf43-202ENST00000374165 OR1B1Q8NGR6 318 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 PARLQ9H300 379 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 ZFAND3Q9H8U3 227 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 ELOA3CA0A087WX78 387 aaPredicted RBP13.44□□□□□ -0.26
C9orf43-202ENST00000374165 PDE6DO43924 150 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
C9orf43-202ENST00000374165 OR10J4P0C629 311 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 NSUN5P1Q3KNT7 163 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 LINC00305Q7Z4B0 112 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 RAX2Q96IS3 184 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 SMIM7Q9BQ49 75 aa13.44□□□□□ -0.26
C9orf43-202ENST00000374165 LYZP61626 148 aa13.43□□□□□ -0.26
C9orf43-202ENST00000374165 ZNF674Q2M3X9 581 aa13.43□□□□□ -0.26
C9orf43-202ENST00000374165 FAM209BQ5JX69 171 aa13.43□□□□□ -0.26
C9orf43-202ENST00000374165 ZNF600Q6ZNG1 722 aa13.43□□□□□ -0.26
C9orf43-202ENST00000374165 Q8WTZ3 238 aa13.43□□□□□ -0.26
C9orf43-202ENST00000374165 CITED1Q99966 193 aa13.43□□□□□ -0.26
C9orf43-202ENST00000374165 TXNDC17Q9BRA2 123 aa13.43□□□□□ -0.26
C9orf43-202ENST00000374165 TMEM167BQ9NRX6 74 aa13.43□□□□□ -0.26
C9orf43-202ENST00000374165 WI2-2373I1.2A0A1W2PRP0 233 aa13.42□□□□□ -0.26
C9orf43-202ENST00000374165 HOXD3P31249 432 aaPredicted RBP13.42□□□□□ -0.26
C9orf43-202ENST00000374165 SLURP1P55000 103 aa13.42□□□□□ -0.26
C9orf43-202ENST00000374165 PLP1P60201 277 aa13.42□□□□□ -0.26
C9orf43-202ENST00000374165 RNF125Q96EQ8 232 aa13.42□□□□□ -0.26
C9orf43-202ENST00000374165 ZNF207O43670 478 aaKnown RBP13.42□□□□□ -0.26
C9orf43-202ENST00000374165 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
C9orf43-202ENST00000374165 SDF2L1Q9HCN8 221 aa13.42□□□□□ -0.26
C9orf43-202ENST00000374165 ZNF320A2RRD8 509 aa13.41□□□□□ -0.26
C9orf43-202ENST00000374165 HYPMO75409 117 aa13.41□□□□□ -0.26
C9orf43-202ENST00000374165 EDN2P20800 178 aa13.41□□□□□ -0.26
C9orf43-202ENST00000374165 RELQ04864 619 aaPredicted RBP13.41□□□□□ -0.26
C9orf43-202ENST00000374165 PNRC1Q12796 327 aaPredicted RBP13.41□□□□□ -0.26
C9orf43-202ENST00000374165 RPEL1Q2QD12 228 aa13.41□□□□□ -0.26
C9orf43-202ENST00000374165 SMCO4Q9NRQ5 59 aa13.41□□□□□ -0.26
C9orf43-202ENST00000374165 NOTCH3Q9UM47 2321 aa13.41□□□□□ -0.26
C9orf43-202ENST00000374165 PYYP10082 97 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 DERL1Q9BUN8 251 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 ARL2-SNX15V9GYD0 113 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 PKD1L1Q8TDX9 2849 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 F6UZH7 168 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 NDUFB4O95168 129 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 SYNJ2BPP57105 145 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 UBE2L3P68036 154 aaKnown RBP13.4□□□□□ -0.26
C9orf43-202ENST00000374165 GPHB5Q86YW7 130 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 TMEM158Q8WZ71 300 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
C9orf43-202ENST00000374165 NAT8Q9UHE5 227 aa13.4□□□□□ -0.26
C9orf43-202ENST00000374165 SCO2A0A1W2PP80 73 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 LINC01619G3V211 115 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 CCL24O00175 119 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 NDUFA4O00483 81 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 SCGB2A1O75556 95 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 APOHP02749 345 aaPredicted RBP13.39□□□□□ -0.27
C9orf43-202ENST00000374165 FABP1P07148 127 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 TMEM241Q24JQ0 296 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 LEMD1Q68G75 181 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 NDUFA11Q86Y39 141 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 ISOC2Q96AB3 205 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 OR51M1Q9H341 326 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 IGHV3OR16-13A0A075B7E8 117 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 IGHV3-49A0A0A0MS15 119 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 IGHV3-74A0A0B4J1X5 117 aa13.39□□□□□ -0.27
C9orf43-202ENST00000374165 FHL3Q13643 280 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms