RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 A0A087WV48 116 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 IGKV1D-43A0A0B4J1Z2 117 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 TRAV8-3A0A0A6YYJ7 113 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 LYPD6BQ8NI32 183 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 RPL27AP46776 148 aaKnown RBP5.47□□□□□ -1.53
CHD6-203ENST00000373233 NDUFV3P56181 108 aaKnown RBP5.47□□□□□ -1.53
CHD6-203ENST00000373233 ZNF645Q8N7E2 425 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 PRRC2CQ9Y520 2896 aaKnown RBP5.47□□□□□ -1.53
CHD6-203ENST00000373233 J3QT63 122 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 DEFB125Q8N687 156 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 PIP4P1Q86T03 277 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 GGNQ86UU5 652 aa5.47□□□□□ -1.53
CHD6-203ENST00000373233 COX8AP10176 69 aa5.46□□□□□ -1.53
CHD6-203ENST00000373233 AMTNQ6UX39 209 aa5.46□□□□□ -1.53
CHD6-203ENST00000373233 OR9G1Q8NH87 305 aa5.46□□□□□ -1.53
CHD6-203ENST00000373233 VSIRQ9H7M9 311 aa5.46□□□□□ -1.53
CHD6-203ENST00000373233 HIVEP3Q5T1R4 2406 aa5.46□□□□□ -1.53
CHD6-203ENST00000373233 FAM90A27PA6NNH2 459 aa5.46□□□□□ -1.53
CHD6-203ENST00000373233 CXXC4Q9H2H0 198 aa5.46□□□□□ -1.53
CHD6-203ENST00000373233 C9JCJ5 164 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 LAGE3Q14657 143 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 FAM214BQ7L5A3 538 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 CT83Q5H943 113 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 MORN2Q502X0 79 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 BRK1Q8WUW1 75 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 TCF19Q9Y242 345 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 U3KQE9 123 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 NCOR2Q9Y618 2525 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 VGLL1Q99990 258 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 SCTP09683 121 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 PRADC1Q9BSG0 188 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 HTN1P15515 57 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 RPL32P62910 135 aaKnown RBP5.46□□□□□ -1.54
CHD6-203ENST00000373233 GFI1Q99684 422 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 TM2D1Q9BX74 207 aa5.46□□□□□ -1.54
CHD6-203ENST00000373233 F2RL2O00254 374 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 IGLL1P15814 213 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 RPRMLQ8N4K4 120 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 ZNF488Q96MN9 340 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 A0A0U1RQV1 116 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 IGFBP3P17936 291 aaPredicted RBP5.45□□□□□ -1.54
CHD6-203ENST00000373233 FGFRL1Q8N441 504 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 MDS2Q8NDY4 140 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 PRDM14Q9GZV8 571 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 SPRR3Q9UBC9 169 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 IFNL4K9M1U5 179 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 SPRY3O43610 288 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 WNT2P09544 360 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 UTF1Q5T230 341 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 FAM236AA0A1B0GUQ0 79 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 FAM236BA0A1B0GV22 79 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 FOXI3A8MTJ6 420 aaPredicted RBP5.45□□□□□ -1.54
CHD6-203ENST00000373233 ZNHIT1O43257 154 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 ID1P41134 155 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 B3GALT5-AS1P59052 145 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 KNCNA6PVL3 124 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 ORMDL2Q53FV1 153 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 SRSF2Q01130 221 aaKnown RBP5.45□□□□□ -1.54
CHD6-203ENST00000373233 C18orf32Q8TCD1 76 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 PKD1L2Q7Z442 2459 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 CNTFRP26992 372 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 RBMY1BA6NDE4 496 aaKnown RBP5.45□□□□□ -1.54
CHD6-203ENST00000373233 RBMY1EA6NEQ0 496 aaKnown RBP5.45□□□□□ -1.54
CHD6-203ENST00000373233 C10orf142B7Z368 130 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 RBMY1DP0C7P1 496 aaKnown RBP5.45□□□□□ -1.54
CHD6-203ENST00000373233 RBMY1A1P0DJD3 496 aaKnown RBP5.45□□□□□ -1.54
CHD6-203ENST00000373233 RBMY1CP0DJD4 496 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 Q6ZUT4 128 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 MIR17HGQ75NE6 70 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 WISP1O95388 367 aa5.45□□□□□ -1.54
CHD6-203ENST00000373233 RBMY1FQ15415 496 aaKnown RBP5.45□□□□□ -1.54
CHD6-203ENST00000373233 ZNF837Q96EG3 531 aaPredicted RBP5.44□□□□□ -1.54
CHD6-203ENST00000373233 MCRIP2Q9BUT9 160 aaKnown RBP5.44□□□□□ -1.54
CHD6-203ENST00000373233 TOMM40O96008 361 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 TCF15Q12870 199 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 GLMPQ8WWB7 406 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 LY96Q9Y6Y9 160 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 SRSF1Q07955 248 aaKnown RBP eCLIP5.44□□□□□ -1.542e-6■■□□□ 11.7
CHD6-203ENST00000373233 LINC00305Q7Z4B0 112 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 NOTCH2Q04721 2471 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 ZC2HC1BQ5TFG8 222 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 MRPL20Q9BYC9 149 aaKnown RBP5.44□□□□□ -1.54
CHD6-203ENST00000373233 PKIGQ9Y2B9 76 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 IGKV3D-15A0A087WSY6 115 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 IGLC7A0M8Q6 106 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 D6R8Y8 96 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 TNFRSF1AP19438 455 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 RHOGP84095 191 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 PHLDA1Q8WV24 401 aaPredicted RBP5.44□□□□□ -1.54
CHD6-203ENST00000373233 ZDHHC16Q969W1 377 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 VWC2LB2RUY7 222 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 ETV2O00321 342 aaPredicted RBP5.44□□□□□ -1.54
CHD6-203ENST00000373233 RRN3P1Q2M238 152 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 NRN1LQ496H8 165 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 FGF12P61328 243 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 ZIC4Q8N9L1 334 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 PRSS33Q8NF86 280 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 OR13A1Q8NGR1 328 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 MGST3O14880 152 aa5.44□□□□□ -1.54
CHD6-203ENST00000373233 UBE2L6O14933 153 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms