RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 ZNF324O75467 553 aaPredicted RBP14.27□□□□□ -0.12
CD40-201ENST00000372276 FRMD6-AS1P0C7T7 363 aa14.27□□□□□ -0.12
CD40-201ENST00000372276 FAM106CPP0CH98 169 aa14.27□□□□□ -0.12
CD40-201ENST00000372276 EFNA4P52798 201 aa14.27□□□□□ -0.12
CD40-201ENST00000372276 PRB3Q04118 309 aaPredicted RBP14.27□□□□□ -0.12
CD40-201ENST00000372276 C20orf144Q9BQM9 153 aa14.27□□□□□ -0.12
CD40-201ENST00000372276 C2orf88Q9BSF0 95 aa14.27□□□□□ -0.12
CD40-201ENST00000372276 POLR3KQ9Y2Y1 108 aaPredicted RBP14.27□□□□□ -0.12
CD40-201ENST00000372276 A0A1W2PS18 150 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 CA1P00915 261 aaPredicted RBP14.26□□□□□ -0.13
CD40-201ENST00000372276 IGLC2P0DOY2 106 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 AMTP48728 403 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 LHFPL4Q7Z7J7 247 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 GSX1Q9H4S2 264 aaPredicted RBP14.26□□□□□ -0.13
CD40-201ENST00000372276 RPH3ALQ9UNE2 315 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 ATRXP46100 2492 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 BSNQ9UPA5 3926 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 A0A1B0GW15 77 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 FOXA3P55318 350 aaPredicted RBP14.26□□□□□ -0.13
CD40-201ENST00000372276 PSG9Q00887 426 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 LEMD1Q68G75 181 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 TOMM20LQ6UXN7 152 aa14.26□□□□□ -0.13
CD40-201ENST00000372276 SMG1Q96Q15 3661 aaKnown RBP14.25□□□□□ -0.13
CD40-201ENST00000372276 LY6HO94772 140 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 HLA-DRB1P01911 266 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 IL4P05112 153 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 TMEM11P17152 192 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 COL8A1P27658 744 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 UBE2E1P51965 193 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 KLRD1Q13241 179 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 KLK9Q2XQG4 91 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 KIAA1644Q3SXP7 199 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 Q6AWC8 147 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 C18orf32Q8TCD1 76 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 BORCS7Q96B45 105 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 FANCD2OSQ96PS1 177 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 SIRPDQ9H106 197 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 AAMDCQ9H7C9 122 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 LPAR2Q9HBW0 351 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 NRN1Q9NPD7 142 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 C21orf62Q9NYP8 219 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 KLK9Q9UKQ9 250 aa14.25□□□□□ -0.13
CD40-201ENST00000372276 KALRNO60229 2985 aa14.24□□□□□ -0.13
CD40-201ENST00000372276 NCBP2LA6PVI3 153 aaKnown RBP14.24□□□□□ -0.13
CD40-201ENST00000372276 SLAQ13239 276 aa14.24□□□□□ -0.13
CD40-201ENST00000372276 C16orf54Q6UWD8 224 aa14.24□□□□□ -0.13
CD40-201ENST00000372276 VN1R17PQ8TDU5 208 aa14.24□□□□□ -0.13
CD40-201ENST00000372276 VAMP8Q9BV40 100 aa14.24□□□□□ -0.13
CD40-201ENST00000372276 SPTA1P02549 2419 aa14.24□□□□□ -0.13
CD40-201ENST00000372276 IGHV2-70DA0A0C4DH43 119 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 GOSR1O95249 250 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 RPL7P18124 248 aaKnown RBP14.23□□□□□ -0.13
CD40-201ENST00000372276 CSN1S1P47710 185 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 RAB9AP51151 201 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 GOLT1AQ6ZVE7 132 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 ALKBH7Q9BT30 221 aaPredicted RBP14.23□□□□□ -0.13
CD40-201ENST00000372276 M0QZK8 103 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 Q56UQ5 140 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 SIGLEC15Q6ZMC9 328 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 ZNF414Q96IQ9 312 aa14.23□□□□□ -0.13
CD40-201ENST00000372276 ABCA4P78363 2273 aa14.22□□□□□ -0.13
CD40-201ENST00000372276 HAX1O00165 279 aa14.22□□□□□ -0.13
CD40-201ENST00000372276 MRPS12O15235 138 aaKnown RBP14.22□□□□□ -0.13
CD40-201ENST00000372276 IGLV2-11P01706 119 aa14.22□□□□□ -0.13
CD40-201ENST00000372276 PSG3Q16557 428 aa14.22□□□□□ -0.13
CD40-201ENST00000372276 PRNTQ86SH4 94 aa14.22□□□□□ -0.13
CD40-201ENST00000372276 DIRC3C9JPN6 131 aa14.21□□□□□ -0.13
CD40-201ENST00000372276 F2Z2F3 143 aa14.21□□□□□ -0.13
CD40-201ENST00000372276 HSBP1O75506 76 aa14.21□□□□□ -0.13
CD40-201ENST00000372276 TOX4O94842 621 aa14.21□□□□□ -0.13
CD40-201ENST00000372276 NDUFB8O95169 186 aa14.21□□□□□ -0.13
CD40-201ENST00000372276 SNRPCP09234 159 aaKnown RBP14.21□□□□□ -0.13
CD40-201ENST00000372276 ASPHD1Q5U4P2 390 aa14.21□□□□□ -0.13
CD40-201ENST00000372276 EXOC3-AS1Q8N2X6 119 aa14.21□□□□□ -0.13
CD40-201ENST00000372276 PSG8Q9UQ74 426 aa14.21□□□□□ -0.13
CD40-201ENST00000372276 M0R143 59 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 PMCHP20382 165 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 CAMPP49913 170 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 KRTDAPP60985 99 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 SSTP61278 116 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 RIGQ13278 110 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 PMCHL1Q16048 86 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 CIARTQ8N365 385 aaPredicted RBP14.2□□□□□ -0.14
CD40-201ENST00000372276 FAM110DQ8TAY7 271 aaPredicted RBP14.2□□□□□ -0.14
CD40-201ENST00000372276 CHCHD1Q96BP2 118 aaKnown RBP14.2□□□□□ -0.14
CD40-201ENST00000372276 MIEN1Q9BRT3 115 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 NDFIP1Q9BT67 221 aa14.2□□□□□ -0.14
CD40-201ENST00000372276 FAM103A1Q9BTL3 118 aaKnown RBP14.2□□□□□ -0.14
CD40-201ENST00000372276 PRB1P04280 392 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 CT45A10P0DMU9 189 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 ZFP36P26651 326 aaKnown RBP14.19□□□□□ -0.14
CD40-201ENST00000372276 GDF5OSQ5U4N7 250 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 TCF24Q7RTU0 167 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 ZNF843Q8N446 348 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 OR2D3Q8NGH3 330 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 SGK494Q96LW2 274 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 FBXL7Q9UJT9 491 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 CFAP46Q8IYW2 2715 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 H3BTX0 84 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 CHEK1O14757 476 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms