RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 OR8I2Q8N0Y5 310 aa13.68□□□□□ -0.22
VEGFA-205ENST00000372067 MRPL36Q9P0J6 103 aaKnown RBP13.68□□□□□ -0.22
VEGFA-205ENST00000372067 DPM3Q9P2X0 92 aa13.68□□□□□ -0.22
VEGFA-205ENST00000372067 TRBV20OR9-2A0A075B6H5 130 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 LINC00479Q96M42 142 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 TCRBV4S1A1TA0A5B7 111 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 BVES-AS1Q5T3Y7 98 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 MRPL54Q6P161 138 aaKnown RBP13.67□□□□□ -0.22
VEGFA-205ENST00000372067 TEX45Q8NA69 505 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 GNB4Q9HAV0 340 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 DLX6P56179 175 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 RPEL1Q2QD12 228 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 KLHDC1Q8N7A1 406 aa13.67□□□□□ -0.22
VEGFA-205ENST00000372067 EAF1Q96JC9 268 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-205ENST00000372067 IGLV2-23P01705 113 aa13.66□□□□□ -0.22
VEGFA-205ENST00000372067 PMCHP20382 165 aa13.66□□□□□ -0.22
VEGFA-205ENST00000372067 GNG5P63218 68 aa13.66□□□□□ -0.22
VEGFA-205ENST00000372067 KLF17Q5JT82 389 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-205ENST00000372067 PERPQ96FX8 193 aa13.66□□□□□ -0.22
VEGFA-205ENST00000372067 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.66□□□□□ -0.222e-8■■■□□ 14.7
VEGFA-205ENST00000372067 MRPL18Q9H0U6 180 aaKnown RBP13.66□□□□□ -0.22
VEGFA-205ENST00000372067 PGPA6NDG6 321 aa13.65□□□□□ -0.22
VEGFA-205ENST00000372067 AMTP48728 403 aa13.65□□□□□ -0.22
VEGFA-205ENST00000372067 FAM19A2Q8N3H0 131 aa13.65□□□□□ -0.22
VEGFA-205ENST00000372067 KIR3DL3Q8N743 410 aa13.65□□□□□ -0.22
VEGFA-205ENST00000372067 RASL11BQ9BPW5 248 aa13.65□□□□□ -0.22
VEGFA-205ENST00000372067 A0A1W2PS18 150 aa13.65□□□□□ -0.22
VEGFA-205ENST00000372067 UFSP1Q6NVU6 142 aa13.65□□□□□ -0.22
VEGFA-205ENST00000372067 THYN1Q9P016 225 aa13.65□□□□□ -0.22
VEGFA-205ENST00000372067 MRPL32Q9BYC8 188 aaKnown RBP13.65□□□□□ -0.22
VEGFA-205ENST00000372067 NUDT3O95989 172 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 UQCRFS1P47985 274 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 C19orf24Q9BVV8 132 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 GGTLC3B5MD39 225 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 FOXL1Q12952 345 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 NAT8BQ9UHF3 227 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 SNURFLB1AK76 121 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 FNDC10F2Z333 226 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 TNFRSF13BO14836 293 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-205ENST00000372067 GNLYP22749 145 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 SPATA12Q7Z6I5 190 aa13.64□□□□□ -0.23
VEGFA-205ENST00000372067 CA1P00915 261 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-205ENST00000372067 Q0VG73 95 aa13.63□□□□□ -0.23
VEGFA-205ENST00000372067 NEGR1Q7Z3B1 354 aa13.63□□□□□ -0.23
VEGFA-205ENST00000372067 SPENQ96T58 3664 aaKnown RBP13.63□□□□□ -0.23
VEGFA-205ENST00000372067 IGHV3-23P01764 117 aa13.63□□□□□ -0.23
VEGFA-205ENST00000372067 FOXE3Q13461 319 aa13.63□□□□□ -0.23
VEGFA-205ENST00000372067 ZNF841Q6ZN19 808 aa13.63□□□□□ -0.23
VEGFA-205ENST00000372067 NEU4Q8WWR8 484 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-205ENST00000372067 Q56UQ5 140 aa13.63□□□□□ -0.23
VEGFA-205ENST00000372067 IBA57Q5T440 356 aaKnown RBP13.63□□□□□ -0.23
VEGFA-205ENST00000372067 IGHV3-35A0A0C4DH35 117 aa13.62□□□□□ -0.23
VEGFA-205ENST00000372067 CGB1A6NKQ9 187 aa13.62□□□□□ -0.23
VEGFA-205ENST00000372067 IGHV3OR16-10A0A075B7F0 116 aa13.62□□□□□ -0.23
VEGFA-205ENST00000372067 HIGD1AQ9Y241 93 aa13.62□□□□□ -0.23
VEGFA-205ENST00000372067 ACACBO00763 2458 aa13.62□□□□□ -0.23
VEGFA-205ENST00000372067 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 IGLV1-47P01700 117 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 ZNF479Q96JC4 524 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 CHODLQ9H9P2 273 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 K7EN84 100 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 DAZAP1Q96EP5 407 aaKnown RBP13.61□□□□□ -0.23
VEGFA-205ENST00000372067 SLC25A2Q9BXI2 301 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 IL36BQ9NZH7 164 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 NBR2O15453 112 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 PSG3Q16557 428 aa13.61□□□□□ -0.23
VEGFA-205ENST00000372067 TMEM249Q2WGJ8 235 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 FBXL19-AS1Q494R0 122 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 ZNF503Q96F45 646 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 PGPEP1Q9NXJ5 209 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 A0A1W2PRE2 83 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 SCGB1A1P11684 91 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 CKS1BP61024 79 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 PRR31Q5SQ13 230 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 C8orf31Q8N9H6 132 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 JMJD8Q96S16 334 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 ZNF331Q9NQX6 463 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-205ENST00000372067 IGHV3OR16-8A0A075B7F1 116 aa13.6□□□□□ -0.23
VEGFA-205ENST00000372067 CAMPP49913 170 aa13.59□□□□□ -0.23
VEGFA-205ENST00000372067 PATE2Q6UY27 113 aa13.59□□□□□ -0.23
VEGFA-205ENST00000372067 VMO1Q7Z5L0 202 aa13.59□□□□□ -0.23
VEGFA-205ENST00000372067 KCNS1Q96KK3 526 aa13.59□□□□□ -0.23
VEGFA-205ENST00000372067 F11RQ9Y624 299 aaKnown RBP13.59□□□□□ -0.23
VEGFA-205ENST00000372067 PEX7O00628 323 aa13.59□□□□□ -0.23
VEGFA-205ENST00000372067 ZNF207O43670 478 aaKnown RBP13.59□□□□□ -0.23
VEGFA-205ENST00000372067 TRAV9-2A0A087WT02 112 aa13.59□□□□□ -0.23
VEGFA-205ENST00000372067 MFAP2P55001 183 aa13.59□□□□□ -0.23
VEGFA-205ENST00000372067 TMUB1Q9BVT8 246 aa13.59□□□□□ -0.23
VEGFA-205ENST00000372067 ZNF324O75467 553 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-205ENST00000372067 ECSCRQ19T08 205 aa13.58□□□□□ -0.24
VEGFA-205ENST00000372067 FAM231BA6NCW3 169 aa13.58□□□□□ -0.24
VEGFA-205ENST00000372067 RUSC1-AS1Q66K80 236 aa13.58□□□□□ -0.24
VEGFA-205ENST00000372067 CHRDL1Q9BU40 450 aa13.58□□□□□ -0.24
VEGFA-205ENST00000372067 BRI3O95415 125 aa13.57□□□□□ -0.24
VEGFA-205ENST00000372067 GATA3P23771 443 aa13.57□□□□□ -0.24
VEGFA-205ENST00000372067 CCDC144NLQ6NUI1 221 aa13.57□□□□□ -0.24
VEGFA-205ENST00000372067 GAGE10A6NGK3 116 aa13.57□□□□□ -0.24
VEGFA-205ENST00000372067 IL4P05112 153 aa13.57□□□□□ -0.24
VEGFA-205ENST00000372067 ZNF137PP52743 207 aa13.57□□□□□ -0.24
VEGFA-205ENST00000372067 TPPP3Q9BW30 176 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms