RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 FAM106CPP0CH98 169 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 APELAP0DMC3 54 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 TMEM11P17152 192 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 TTC9CQ8N5M4 171 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 C3orf56Q8N813 242 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 RBM14Q96PK6 669 aaKnown RBP11.07□□□□□ -0.64
LDB3-204ENST00000372066 V9GYV3 84 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 IGLV2-8P01709 118 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 NBEAP1P0C6P0 100 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 PSG1P11464 419 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 C19orf35Q6ZS72 473 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 TEX29Q8N6K0 151 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 C5orf17Q8NAS9 161 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 GSN-AS1Q9NRJ2 163 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 MRPL27Q9P0M9 148 aaKnown RBP11.07□□□□□ -0.64
LDB3-204ENST00000372066 TRAPPC1Q9Y5R8 145 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 IGKV1-17P01599 117 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 HLA-DRB1P01911 266 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 RD3LP0DJH9 198 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 HIST1H1BP16401 226 aaKnown RBP11.06□□□□□ -0.64
LDB3-204ENST00000372066 LYZP61626 148 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 CX3CL1P78423 397 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 TMEM183BQ1AE95 376 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 RUSC1-AS1Q66K80 236 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 TMEM68Q96MH6 324 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 TBX15Q96SF7 602 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 NIT2Q9NQR4 276 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 EPDR1Q9UM22 224 aa11.06□□□□□ -0.64
LDB3-204ENST00000372066 IGHV3-21A0A0B4J1V1 117 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 A0A1W2PRD5 423 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 A0A1W2PRF3 423 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 A0A1W2PRM7 423 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 XKRY2A2RUG3 117 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 IFITM10A6NMD0 228 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 AVPP01185 164 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 MT-ND6P03923 174 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 S100A7P31151 101 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 MFAP4P55083 255 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 UBE2G1P62253 170 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 IBA57Q5T440 356 aaKnown RBP11.05□□□□□ -0.64
LDB3-204ENST00000372066 DYNAPQ8N1N2 210 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 FMC1Q96HJ9 113 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 ATG101Q9BSB4 218 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 SLC25A39Q9BZJ4 359 aaPredicted RBP11.05□□□□□ -0.64
LDB3-204ENST00000372066 KLF12Q9Y4X4 402 aa11.05□□□□□ -0.64
LDB3-204ENST00000372066 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 NCBP2LA6PVI3 153 aaKnown RBP11.04□□□□□ -0.64
LDB3-204ENST00000372066 H3BRN7 92 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 SLC25A5P05141 298 aaKnown RBP11.04□□□□□ -0.64
LDB3-204ENST00000372066 HIST1H1EP10412 219 aaKnown RBP11.04□□□□□ -0.64
LDB3-204ENST00000372066 HILS1P60008 231 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 KLK9Q2XQG4 91 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 WDR73Q6P4I2 378 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 JMJD8Q96S16 334 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 TXN2Q99757 166 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 GPR61Q9BZJ8 451 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 OTORQ9NRC9 128 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
LDB3-204ENST00000372066 PGPA6NDG6 321 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 SLC17A3O00476 420 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 GATCO43716 136 aaKnown RBP11.03□□□□□ -0.64
LDB3-204ENST00000372066 GNG7O60262 68 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 MGST1P10620 155 aaKnown RBP11.03□□□□□ -0.64
LDB3-204ENST00000372066 FCGR2BP31994 310 aaPredicted RBP11.03□□□□□ -0.64
LDB3-204ENST00000372066 OR5I1Q13606 314 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 ASPHD1Q5U4P2 390 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 ZNF600Q6ZNG1 722 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 BPIFA4PQ86YQ2 179 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 LYPD1Q8N2G4 141 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 Q8N9W7 124 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 FANCD2OSQ96PS1 177 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 SHANK2-AS3Q9BTD1 123 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 WI2-2373I1.2A0A1W2PRP0 233 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 SMIM27A0A1W2PRY6 76 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 WIPF1O43516 503 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 CD24P25063 80 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
LDB3-204ENST00000372066 RASL11AQ6T310 242 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 RNF125Q96EQ8 232 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 GNB1LQ9BYB4 327 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 Q9H3A6 140 aa11.03□□□□□ -0.64
LDB3-204ENST00000372066 ZMAT5Q9UDW3 170 aaKnown RBP11.03□□□□□ -0.64
LDB3-204ENST00000372066 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 NPFFO15130 113 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 SAA4P35542 130 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 NDPQ00604 133 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 GFI1BQ5VTD9 330 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 OR10D4PQ8NGN7 298 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 FAM110DQ8TAY7 271 aaPredicted RBP11.02□□□□□ -0.65
LDB3-204ENST00000372066 BLNKQ8WV28 456 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 GPR82Q96P67 336 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 HIST1H2BLQ99880 126 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 FAM103A1Q9BTL3 118 aaKnown RBP11.02□□□□□ -0.65
LDB3-204ENST00000372066 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.65
LDB3-204ENST00000372066 J3QLI3 93 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms