RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TBX15Q96SF7 602 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 A8MWL6 223 aa22.77■■□□□ 1.24
SSBP3-204ENST00000371320 EFNA4P52798 201 aa22.77■■□□□ 1.24
SSBP3-204ENST00000371320 CT83Q5H943 113 aa22.77■■□□□ 1.24
SSBP3-204ENST00000371320 FCGR2BP31994 310 aaPredicted RBP22.77■■□□□ 1.23
SSBP3-204ENST00000371320 TCF24Q7RTU0 167 aa22.77■■□□□ 1.23
SSBP3-204ENST00000371320 C17orf77Q96MU5 243 aa22.77■■□□□ 1.23
SSBP3-204ENST00000371320 PRORYQ9H606 182 aa22.77■■□□□ 1.23
SSBP3-204ENST00000371320 VWC2LB2RUY7 222 aa22.76■■□□□ 1.23
SSBP3-204ENST00000371320 IGLC2P0DOY2 106 aa22.76■■□□□ 1.23
SSBP3-204ENST00000371320 TMEM190Q8WZ59 177 aa22.76■■□□□ 1.23
SSBP3-204ENST00000371320 A0A1W2PS18 150 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 HLA-DRB1P01911 266 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 CAMPP49913 170 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 TOMM20LQ6UXN7 152 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 PRNTQ86SH4 94 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 ZNF48Q96MX3 618 aaPredicted RBP22.75■■□□□ 1.23
SSBP3-204ENST00000371320 NDUFAF3Q9BU61 184 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 CHD8Q9HCK8 2581 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 IGLV2-11P01706 119 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 Q56UQ5 140 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 C1orf194Q5T5A4 169 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 S100A7AQ86SG5 101 aa22.75■■□□□ 1.23
SSBP3-204ENST00000371320 HIVEP3Q5T1R4 2406 aa22.74■■□□□ 1.23
SSBP3-204ENST00000371320 ITLN2Q8WWU7 325 aaPredicted RBP22.74■■□□□ 1.23
SSBP3-204ENST00000371320 THYN1Q9P016 225 aa22.74■■□□□ 1.23
SSBP3-204ENST00000371320 IGHV2-70DA0A0C4DH43 119 aa22.73■■□□□ 1.23
SSBP3-204ENST00000371320 A0A1B0GXF2 115 aa22.73■■□□□ 1.23
SSBP3-204ENST00000371320 AMTP48728 403 aa22.73■■□□□ 1.23
SSBP3-204ENST00000371320 LYPD1Q8N2G4 141 aa22.73■■□□□ 1.23
SSBP3-204ENST00000371320 C21orf62Q9NYP8 219 aa22.73■■□□□ 1.23
SSBP3-204ENST00000371320 TBL2Q9Y4P3 447 aaKnown RBP22.73■■□□□ 1.23
SSBP3-204ENST00000371320 SIGLEC15Q6ZMC9 328 aa22.73■■□□□ 1.23
SSBP3-204ENST00000371320 CIARTQ8N365 385 aaPredicted RBP22.73■■□□□ 1.23
SSBP3-204ENST00000371320 SSBP4Q9BWG4 385 aaPredicted RBP22.73■■□□□ 1.23
SSBP3-204ENST00000371320 PIEZO1Q92508 2521 aa22.72■■□□□ 1.23
SSBP3-204ENST00000371320 PMCHP20382 165 aa22.72■■□□□ 1.23
SSBP3-204ENST00000371320 C18orf32Q8TCD1 76 aa22.72■■□□□ 1.23
SSBP3-204ENST00000371320 GTSF1Q8WW33 167 aa22.72■■□□□ 1.23
SSBP3-204ENST00000371320 TRBV6-1A0A0K0K1D8 114 aa22.72■■□□□ 1.23
SSBP3-204ENST00000371320 F8W735 103 aaPredicted RBP22.72■■□□□ 1.23
SSBP3-204ENST00000371320 MRPS12O15235 138 aaKnown RBP22.72■■□□□ 1.23
SSBP3-204ENST00000371320 FAM106CPP0CH98 169 aa22.72■■□□□ 1.23
SSBP3-204ENST00000371320 NDUFB8O95169 186 aa22.71■■□□□ 1.23
SSBP3-204ENST00000371320 HBBP68871 147 aa22.71■■□□□ 1.23
SSBP3-204ENST00000371320 NRN1Q9NPD7 142 aa22.71■■□□□ 1.23
SSBP3-204ENST00000371320 FBXL7Q9UJT9 491 aa22.71■■□□□ 1.23
SSBP3-204ENST00000371320 ZNF324O75467 553 aaPredicted RBP22.7■■□□□ 1.23
SSBP3-204ENST00000371320 OR2J3O76001 311 aa22.7■■□□□ 1.23
SSBP3-204ENST00000371320 COL8A1P27658 744 aa22.7■■□□□ 1.23
SSBP3-204ENST00000371320 UQCRFS1P47985 274 aa22.7■■□□□ 1.23
SSBP3-204ENST00000371320 UBE2E1P51965 193 aa22.7■■□□□ 1.23
SSBP3-204ENST00000371320 BCL6BQ8N143 479 aaPredicted RBP22.7■■□□□ 1.23
SSBP3-204ENST00000371320 ZNF414Q96IQ9 312 aa22.7■■□□□ 1.23
SSBP3-204ENST00000371320 PGLYRP4Q96LB8 373 aa22.7■■□□□ 1.23
SSBP3-204ENST00000371320 GFRA4Q9GZZ7 299 aa22.7■■□□□ 1.23
SSBP3-204ENST00000371320 IGHV7-81A0A0B4J1V7 117 aa22.7■■□□□ 1.22
SSBP3-204ENST00000371320 KIR2DL5BA0A0G2JN68 375 aa22.7■■□□□ 1.22
SSBP3-204ENST00000371320 KIR2DL5BA0A0G2JPC4 375 aa22.7■■□□□ 1.22
SSBP3-204ENST00000371320 KIR2DL5AQ8N109 375 aa22.7■■□□□ 1.22
SSBP3-204ENST00000371320 TMEM75Q8N9X5 138 aa22.7■■□□□ 1.22
SSBP3-204ENST00000371320 OR2D3Q8NGH3 330 aa22.7■■□□□ 1.22
SSBP3-204ENST00000371320 C1RLQ9NZP8 487 aa22.7■■□□□ 1.22
SSBP3-204ENST00000371320 SOX21Q9Y651 276 aaPredicted RBP22.7■■□□□ 1.22
SSBP3-204ENST00000371320 NPIPB6E9PJ23 425 aa22.69■■□□□ 1.22
SSBP3-204ENST00000371320 K7EQM0 130 aa22.69■■□□□ 1.22
SSBP3-204ENST00000371320 EGR2P11161 476 aaPredicted RBP22.69■■□□□ 1.22
SSBP3-204ENST00000371320 VN1R17PQ8TDU5 208 aa22.69■■□□□ 1.22
SSBP3-204ENST00000371320 IGHV3-23P01764 117 aa22.69■■□□□ 1.22
SSBP3-204ENST00000371320 KRTDAPP60985 99 aa22.69■■□□□ 1.22
SSBP3-204ENST00000371320 TEX43Q6ZNM6 134 aa22.69■■□□□ 1.22
SSBP3-204ENST00000371320 RBPMS2Q6ZRY4 209 aaKnown RBP22.69■■□□□ 1.22
SSBP3-204ENST00000371320 Q8N9W7 124 aa22.69■■□□□ 1.22
SSBP3-204ENST00000371320 FAM120AOSQ5T036 256 aa22.68■■□□□ 1.22
SSBP3-204ENST00000371320 ALKBH7Q9BT30 221 aaPredicted RBP22.68■■□□□ 1.22
SSBP3-204ENST00000371320 BPESC1Q9GZL8 116 aa22.68■■□□□ 1.22
SSBP3-204ENST00000371320 RNF114Q9Y508 228 aa22.68■■□□□ 1.22
SSBP3-204ENST00000371320 C19orf84I3L1E1 186 aa22.67■■□□□ 1.22
SSBP3-204ENST00000371320 GNLYP22749 145 aa22.67■■□□□ 1.22
SSBP3-204ENST00000371320 KLF5Q13887 457 aaPredicted RBP22.67■■□□□ 1.22
SSBP3-204ENST00000371320 OR4B1Q8NGF8 309 aa22.67■■□□□ 1.22
SSBP3-204ENST00000371320 ZFP30Q9Y2G7 519 aa22.67■■□□□ 1.22
SSBP3-204ENST00000371320 FAM231BA6NCW3 169 aa22.67■■□□□ 1.22
SSBP3-204ENST00000371320 LMO4P61968 165 aa22.67■■□□□ 1.22
SSBP3-204ENST00000371320 Q71RC1 249 aaPredicted RBP22.67■■□□□ 1.22
SSBP3-204ENST00000371320 WNK2Q9Y3S1 2297 aa22.67■■□□□ 1.22
SSBP3-204ENST00000371320 OR2T8A6NH00 312 aa22.66■■□□□ 1.22
SSBP3-204ENST00000371320 SCGB2A1O75556 95 aa22.66■■□□□ 1.22
SSBP3-204ENST00000371320 PDE6HQ13956 83 aa22.66■■□□□ 1.22
SSBP3-204ENST00000371320 AJUBAQ96IF1 538 aa22.66■■□□□ 1.22
SSBP3-204ENST00000371320 PSG8Q9UQ74 426 aa22.66■■□□□ 1.22
SSBP3-204ENST00000371320 PSG3Q16557 428 aa22.65■■□□□ 1.22
SSBP3-204ENST00000371320 TDRG1Q3Y452 100 aa22.65■■□□□ 1.22
SSBP3-204ENST00000371320 FAM19A2Q8N3H0 131 aa22.65■■□□□ 1.22
SSBP3-204ENST00000371320 DIRC3C9JPN6 131 aa22.64■■□□□ 1.22
SSBP3-204ENST00000371320 SAA4P35542 130 aa22.64■■□□□ 1.22
SSBP3-204ENST00000371320 ZC2HC1AQ96GY0 325 aa22.64■■□□□ 1.22
SSBP3-204ENST00000371320 AAMDCQ9H7C9 122 aa22.64■■□□□ 1.21
SSBP3-204ENST00000371320 ITPR1Q14643 2758 aa22.63■■□□□ 1.21
SSBP3-204ENST00000371320 M0R3E3 92 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms