RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 DOCK11Q5JSL3 2073 aa9.1□□□□□ -0.95
COL11A1-203ENST00000370096 LINC00479Q96M42 142 aa9.1□□□□□ -0.95
COL11A1-203ENST00000370096 PRDM6Q9NQX0 595 aa9.1□□□□□ -0.95
COL11A1-203ENST00000370096 MSRB2Q9Y3D2 182 aa9.1□□□□□ -0.95
COL11A1-203ENST00000370096 BRD3OSQ6XYD6 125 aa9.1□□□□□ -0.95
COL11A1-203ENST00000370096 POLR3KQ9Y2Y1 108 aaPredicted RBP9.1□□□□□ -0.95
COL11A1-203ENST00000370096 IGHG3P01860 377 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 ZNF329Q86UD4 541 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 GTF3C1Q12789 2109 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 SHANK3Q9BYB0 1731 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 ANXA2RQ3ZCQ2 193 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 NXPH4O95158 308 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 SPRR3Q9UBC9 169 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 PATJQ8NI35 1801 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 NTF4P34130 210 aa9.09□□□□□ -0.95
COL11A1-203ENST00000370096 IGHV1-46P01743 117 aa9.09□□□□□ -0.96
COL11A1-203ENST00000370096 MLANAQ16655 118 aa9.09□□□□□ -0.96
COL11A1-203ENST00000370096 CFHR2P36980 270 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 C1orf53Q5VUE5 145 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 KIF26BQ2KJY2 2108 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 IGHV1-3A0A0C4DH29 117 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 SLC25A16P16260 332 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 TMEM213A2RRL7 107 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 RPP25LQ8N5L8 163 aaKnown RBP9.08□□□□□ -0.96
COL11A1-203ENST00000370096 AHDC1Q5TGY3 1603 aaPredicted RBP9.08□□□□□ -0.96
COL11A1-203ENST00000370096 TRAV26-2A0A0B4J265 109 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 FOXG1P55316 489 aaPredicted RBP9.08□□□□□ -0.96
COL11A1-203ENST00000370096 DTX1Q86Y01 620 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 LY6G5BQ8NDX9 201 aa9.08□□□□□ -0.96
COL11A1-203ENST00000370096 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.07□□□□□ -0.96
COL11A1-203ENST00000370096 NPSP0C0P6 89 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 LIME1Q9H400 295 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 SEC16AO15027 2179 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 A0A1W2PR77 199 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 RBM3P98179 157 aaKnown RBP9.07□□□□□ -0.96
COL11A1-203ENST00000370096 LINC01559Q495D7 138 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 SPSB3Q6PJ21 355 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 LINC00114Q6XXX2 140 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 SS18L2Q9UHA2 77 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 PINLYPA6NC86 204 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 ZNF561-AS1K7EIQ3 104 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 ASPHD1Q5U4P2 390 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 KLHL30-AS1Q8NEE0 82 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 REG4Q9BYZ8 158 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 PSME4Q14997 1843 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 MMP23AO75900 390 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 THAP8Q8NA92 274 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 DSCR8Q96T75 97 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 IGKV1-12A0A0C4DH73 117 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 GAGE12JA6NER3 117 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 IGKV1D-12P01611 117 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 FGF6P10767 208 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 CEACAM8P31997 349 aaPredicted RBP9.07□□□□□ -0.96
COL11A1-203ENST00000370096 GAGE4Q13068 117 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 GAGE5Q13069 117 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 NKAPP1Q8N9T2 125 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 RNASE6Q93091 150 aaKnown RBP9.07□□□□□ -0.96
COL11A1-203ENST00000370096 SCRT2Q9NQ03 307 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 DOCK6Q96HP0 2047 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 STRCP1A6NGW2 1772 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 K7ERJ3 54 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 IFI6P09912 130 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 UBL5Q9BZL1 73 aa9.07□□□□□ -0.96
COL11A1-203ENST00000370096 LINC01549A6NIU2 74 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 LY6DQ14210 128 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 PIP4P2Q8N4L2 257 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 FAM90A9PA6NNJ1 464 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 FOXF2Q12947 444 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 GAGE6Q13070 117 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 A0A1B0GWJ7 208 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 CGB3P0DN86 165 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 CRLF1O75462 422 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 TRGV9Q99603 122 aa9.06□□□□□ -0.96
COL11A1-203ENST00000370096 TRBV7-1A0A0A6YYK4 115 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 IGKV1-27A0A075B6S5 117 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 IGHG4P01861 327 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 SUPT4H1P63272 117 aaKnown RBP9.05□□□□□ -0.96
COL11A1-203ENST00000370096 IL17RELQ6ZVW7 336 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 LRRK1Q38SD2 2015 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 GBF1Q92538 1859 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 IGHV1-8P0DP01 117 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 MARF1Q9Y4F3 1742 aaKnown RBP9.05□□□□□ -0.96
COL11A1-203ENST00000370096 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
COL11A1-203ENST00000370096 H3BUX3 64 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 CD177Q8N6Q3 437 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 DOCK4Q8N1I0 1966 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 KMT2EQ8IZD2 1858 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 A0A096LPF7 62 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 IGKV1-5P01602 117 aa9.05□□□□□ -0.96
COL11A1-203ENST00000370096 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
COL11A1-203ENST00000370096 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
COL11A1-203ENST00000370096 C1orf43Q9BWL3 253 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms