RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PCNX1Q96RV3 2341 aa7.16□□□□□ -1.26
SYNE1-206ENST00000367253 CADP27708 2225 aa7.16□□□□□ -1.26
SYNE1-206ENST00000367253 A0A087WV48 116 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 INSP01308 110 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 MST1LQ2TV78 715 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 CLEC19AQ6UXS0 136 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 LRRC75A-AS1Q8N1F1 130 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 FBLN5Q9UBX5 448 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 ERG28Q9UKR5 140 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 ATG2BQ96BY7 2078 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 CACNA1HO95180 2353 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 PYYP10082 97 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 SPSB3Q6PJ21 355 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 MPLKIPQ8TAP9 179 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 SLC50A1Q9BRV3 221 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 MYO16Q9Y6X6 1858 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 C9orf118A6NHY6 69 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 FSTP19883 344 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 HCP5Q6MZN7 132 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 C1QL4Q86Z23 238 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 SCARF2Q96GP6 870 aaPredicted RBP7.15□□□□□ -1.26
SYNE1-206ENST00000367253 RALGAPA1Q6GYQ0 2036 aa7.15□□□□□ -1.26
SYNE1-206ENST00000367253 A0A0G2JNJ9 132 aa7.15□□□□□ -1.27
SYNE1-206ENST00000367253 PIP4P1Q86T03 277 aa7.15□□□□□ -1.27
SYNE1-206ENST00000367253 SMIM8Q96KF7 97 aa7.15□□□□□ -1.27
SYNE1-206ENST00000367253 TMEM133Q9H2Q1 129 aa7.15□□□□□ -1.27
SYNE1-206ENST00000367253 Q9UFV3 132 aa7.15□□□□□ -1.27
SYNE1-206ENST00000367253 IL11P20809 199 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 FGFRL1Q8N441 504 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 LSM4Q9Y4Z0 139 aaKnown RBP7.14□□□□□ -1.27
SYNE1-206ENST00000367253 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 MBD3L4A6NDZ8 208 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-206ENST00000367253 MBD3L3A6NE82 208 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-206ENST00000367253 MBD3L5A6NJ08 208 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-206ENST00000367253 RS1O15537 224 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 RNF182Q8N6D2 247 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 MBD3L2Q8NHZ7 208 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-206ENST00000367253 VWCEQ96DN2 955 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 PDCD11Q14690 1871 aaKnown RBP7.14□□□□□ -1.27
SYNE1-206ENST00000367253 IZUMO1RA6ND01 250 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 CT62P0C5K7 136 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 SH2D6Q7Z4S9 175 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 A0A1B0GW64 132 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 H3BMM0 161 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 TFF1P04155 84 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 BAALCQ8WXS3 180 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 MYOFQ9NZM1 2061 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 H3BMG7 143 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 LYL1P12980 280 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 OR11H6Q8NGC7 330 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 TOMM7Q9P0U1 55 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 ZNF319Q9P2F9 582 aa7.14□□□□□ -1.27
SYNE1-206ENST00000367253 HBDP02042 147 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 PRB2P02812 416 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-206ENST00000367253 RPL36AP83881 106 aaKnown RBP7.13□□□□□ -1.27
SYNE1-206ENST00000367253 LINC00305Q7Z4B0 112 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 ZNF525Q8N782 197 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 RPL36ALQ969Q0 106 aaKnown RBP7.13□□□□□ -1.27
SYNE1-206ENST00000367253 RNF5Q99942 180 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 PGLYRP1O75594 196 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-206ENST00000367253 MMP23AO75900 390 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 ZNF146Q15072 292 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 FAM90A2PQ658T7 463 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 Q6ZWC4 215 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 CIARTQ8N365 385 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-206ENST00000367253 PEX7O00628 323 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 INSL3P51460 131 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 PAX8Q06710 450 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 IGF2-ASQ6U949 168 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 ZNF645Q8N7E2 425 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 RPP21Q9H633 154 aaKnown RBP7.13□□□□□ -1.27
SYNE1-206ENST00000367253 FNDC1Q4ZHG4 1894 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-206ENST00000367253 A0A1W2PRE2 83 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 M0R2P5 195 aa7.13□□□□□ -1.27
SYNE1-206ENST00000367253 RNASE2P10153 161 aaKnown RBP7.13□□□□□ -1.27
SYNE1-206ENST00000367253 CLPSL1A2RUU4 121 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 CLPSP04118 112 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 ELANEP08246 267 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 IGHV1-2P23083 117 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 ZNF826PQ6ZT77 177 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 VMO1Q7Z5L0 202 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 C5orf66Q9H5L9 145 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 MDC1Q14676 2089 aaKnown RBP7.12□□□□□ -1.27
SYNE1-206ENST00000367253 hDV102S1A0JD36 115 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 IGLC2P0DOY2 106 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 IGLC3P0DOY3 106 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 RHOGP84095 191 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 AMTNQ6UX39 209 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 VWA8A3KMH1 1905 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 BGLAPP02818 100 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 CRYGCP07315 174 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 CXCL1P09341 107 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 NANOS3P60323 173 aaKnown RBP7.12□□□□□ -1.27
SYNE1-206ENST00000367253 COQ2Q96H96 371 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 CHAC1Q9BUX1 264 aa7.12□□□□□ -1.27
SYNE1-206ENST00000367253 VWC2LB2RUY7 222 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 LINC00271P0C7V0 271 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 ZNF138P52744 262 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 PMAIP1Q13794 54 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms