RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 DPM2O94777 84 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 TCRAP04437 139 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 CD28P10747 220 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 TPTE2P1Q5T6R2 138 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 NOTCH2Q04721 2471 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 IGHV1-3A0A0C4DH29 117 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-205ENST00000367251 TIMM23O14925 209 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 GZMBP10144 247 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 NTF4P34130 210 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 RPL36AP83881 106 aaKnown RBP7.37□□□□□ -1.23
SYNE1-205ENST00000367251 GFI1BQ5VTD9 330 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 TMEM219Q86XT9 240 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 Q8TCH9 128 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 RPL36ALQ969Q0 106 aaKnown RBP7.37□□□□□ -1.23
SYNE1-205ENST00000367251 CITED2Q99967 270 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-205ENST00000367251 APOMO95445 188 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 DAD1P61803 113 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 ALPK2Q86TB3 2170 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 IGKV1D-17A0A075B6S4 117 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 H3BUX3 64 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 SLC25A16P16260 332 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 BRD3OSQ6XYD6 125 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 TCF20Q9UGU0 1960 aaKnown RBP7.37□□□□□ -1.23
SYNE1-205ENST00000367251 NBASA2RRP1 2371 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 ZNF561-AS1K7EIQ3 104 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 TMEM50AO95807 157 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 RNF182Q8N6D2 247 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 VOPP1Q96AW1 172 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 RCHY1Q96PM5 261 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 RALGAPA1Q6GYQ0 2036 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 A0A1B0GV72 72 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 MLNRO43193 412 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 TOMM40O96008 361 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 GATD1Q8NB37 220 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 OR10W1Q8NGF6 305 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 SSBP4Q9BWG4 385 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-205ENST00000367251 A0A0G2JRQ6 117 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 HSD52Q0P140 79 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 Q0VG73 95 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 PIP4P2Q8N4L2 257 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 RMI2Q96E14 147 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 TRAV41A0A0B4J266 112 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 FAM231BA6NCW3 169 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 TFF1P04155 84 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 PAX2Q02962 417 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 PAX8Q06710 450 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 ZCCHC24Q8N2G6 241 aaKnown RBP7.36□□□□□ -1.23
SYNE1-205ENST00000367251 OR2K2Q8NGT1 345 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 SPTBP11277 2137 aa7.36□□□□□ -1.23
SYNE1-205ENST00000367251 RNASE2P10153 161 aaKnown RBP7.36□□□□□ -1.23
SYNE1-205ENST00000367251 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 IGKV1-6A0A0C4DH72 117 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 C22orf46C9J442 243 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 LINC01356Q8N9X3 169 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 ORAOV1Q8WV07 137 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 ZNF492Q9P255 531 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 NUP210Q8TEM1 1887 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-205ENST00000367251 TEX48A0A1B0GUV7 120 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 Q6ZRM9 215 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 ANAPC1Q9H1A4 1944 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 Q6ZS92 163 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 Q96MF0 132 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 DOPEY1Q5JWR5 2465 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 IGHV3-73A0A0B4J1V6 119 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 TRAV3A0A0B4J244 114 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 IGKCP01834 107 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 PSG1P11464 419 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 ZNF672Q499Z4 452 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-205ENST00000367251 CT83Q5H943 113 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 MCRIP2Q9BUT9 160 aaKnown RBP7.35□□□□□ -1.23
SYNE1-205ENST00000367251 PROK2Q9HC23 129 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 TRBV7-1A0A0A6YYK4 115 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 TYMSP04818 313 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 PDE6HQ13956 83 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 ZNF329Q86UD4 541 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 MAPK1IP1LQ8NDC0 245 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 IFI27L1Q96BM0 104 aa7.35□□□□□ -1.23
SYNE1-205ENST00000367251 ABCA7Q8IZY2 2146 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 BUB1B-PAK6H3BSN5 160 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 RPRMLQ8N4K4 120 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 Q8NFD4 153 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 CYSLTR1Q9Y271 337 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 PSG3Q16557 428 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 TMEM155Q4W5P6 130 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 TMEM14BQ9NUH8 114 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 ZNF581Q9P0T4 197 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 DKK4Q9UBT3 224 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 KIF26BQ2KJY2 2108 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 PCP4P48539 62 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 SIGLEC15Q6ZMC9 328 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 LY6G6EA0A0G2JKS1 128 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 PAX9P55771 341 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 FXYD7P58549 80 aa7.34□□□□□ -1.23
SYNE1-205ENST00000367251 UBE2BP63146 152 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms