RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PSMA1P25786 263 aaKnown RBP4.7□□□□□ -1.66
H3F3A-201ENST00000366813 RPL27AP46776 148 aaKnown RBP4.7□□□□□ -1.66
H3F3A-201ENST00000366813 AP2S1P53680 142 aaPredicted RBP4.7□□□□□ -1.66
H3F3A-201ENST00000366813 RTL8BQ17RB0 113 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 HSD17B12Q53GQ0 312 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 AADACL4Q5VUY2 407 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 ZNF600Q6ZNG1 722 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 FAM220AQ7Z4H9 259 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 UBAC2Q8NBM4 344 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 OR8J1Q8NGP2 316 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 TYMSOSQ8TAI1 123 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 PTX4Q96A99 478 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 CPNE2Q96FN4 548 aaPredicted RBP4.7□□□□□ -1.66
H3F3A-201ENST00000366813 TMEM80Q96HE8 168 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 MARVELD1Q9BSK0 173 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 MND1Q9BWT6 205 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 BANF2Q9H503 90 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 FGF20Q9NP95 211 aaPredicted RBP4.7□□□□□ -1.66
H3F3A-201ENST00000366813 TAS2R4Q9NYW5 299 aa4.7□□□□□ -1.66
H3F3A-201ENST00000366813 RBMX2Q9Y388 322 aaKnown RBP4.7□□□□□ -1.66
H3F3A-201ENST00000366813 TRAV2A0A0B4J234 112 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 TRDV1A0A1B0GX56 115 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 LINC00862A6NCI5 91 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 PLA2G10O15496 165 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 ZNF780AO75290 641 aaPredicted RBP4.69□□□□□ -1.66
H3F3A-201ENST00000366813 SNAPC5O75971 98 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 MYL9P24844 172 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 ZNF93P35789 620 aaPredicted RBP4.69□□□□□ -1.66
H3F3A-201ENST00000366813 NKX2-5P52952 324 aaPredicted RBP4.69□□□□□ -1.66
H3F3A-201ENST00000366813 NUTF2P61970 127 aaKnown RBP4.69□□□□□ -1.66
H3F3A-201ENST00000366813 MRPS15P82914 257 aaKnown RBP4.69□□□□□ -1.66
H3F3A-201ENST00000366813 HACD4Q5VWC8 232 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 Q6ZSA8 131 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 SCXQ7RTU7 201 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 VKORC1L1Q8N0U8 176 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 AP3S1Q92572 193 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 SELENOIQ9C0D9 397 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 MIXL1Q9H2W2 232 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 TMEM231Q9H6L2 316 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 SDHAF2Q9NX18 166 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 IMPAD1Q9NX62 359 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 MBD2Q9UBB5 411 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 SSR3Q9UNL2 185 aa4.69□□□□□ -1.66
H3F3A-201ENST00000366813 MRPS16Q9Y3D3 137 aaKnown RBP4.69□□□□□ -1.66
H3F3A-201ENST00000366813 A0A0U1RQV1 116 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 LOC100506127A0A0U1RQW1 187 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 CREBL2O60519 120 aaPredicted RBP4.68□□□□□ -1.66
H3F3A-201ENST00000366813 GLAP06280 429 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 ZBTB25P24278 435 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 PPP3R1P63098 170 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 CCDC58Q4VC31 144 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 Q5BKY6 102 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 STXBP6Q8NFX7 210 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 VN1R17PQ8TDU5 208 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 OR10C1Q96KK4 312 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 HYLS1Q96M11 299 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 FAAP24Q9BTP7 215 aa4.68□□□□□ -1.66
H3F3A-201ENST00000366813 TXNL4BQ9NX01 149 aaKnown RBP4.68□□□□□ -1.66
H3F3A-201ENST00000366813 LOC105371267A0A1B0GV96 52 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 C7orf66A4D0T2 115 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 BET1O15155 118 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 PDCD6O75340 191 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 HBE1P02100 147 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 PRM2P04554 102 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 CD5P06127 495 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 CTSGP08311 255 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 RRASP10301 218 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 SDC2P34741 201 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 Q1RN00 199 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 PSMG4Q5JS54 123 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.67□□□□□ -1.66
H3F3A-201ENST00000366813 OR56B1Q8NGI3 324 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 OR2D2Q9H210 308 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 VSIRQ9H7M9 311 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 C21orf62Q9NYP8 219 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 RDH8Q9NYR8 311 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 RABL2AQ9UBK7 228 aaPredicted RBP4.67□□□□□ -1.66
H3F3A-201ENST00000366813 RABL2BQ9UNT1 228 aa4.67□□□□□ -1.66
H3F3A-201ENST00000366813 IGKV1-6A0A0C4DH72 117 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 A0A0J9YY99 117 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 FABP12A6NFH5 140 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 SNTNA6NMZ2 147 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 H3BMM0 161 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 SIVA1O15304 175 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 IGLV2-8P01709 118 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 ATP5G1P05496 136 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 EIF4EP06730 217 aaKnown RBP4.66□□□□□ -1.66
H3F3A-201ENST00000366813 MGMTP16455 207 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 ATP5G3P48201 142 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 WNT4P56705 351 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 RRAS2P62070 204 aaPredicted RBP4.66□□□□□ -1.66
H3F3A-201ENST00000366813 GPR176Q14439 515 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 RRN3P1Q2M238 152 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 Q56UQ5 140 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 ZNF880Q6PDB4 577 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 GLIPR1L1Q6UWM5 242 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 SLC51BQ86UW2 128 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 C1orf158Q8N1D5 194 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 LINC00612Q8N6U2 182 aa4.66□□□□□ -1.66
H3F3A-201ENST00000366813 OR52I1Q8NGK6 324 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms