RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PSMG3Q9BT73 122 aaPredicted RBP9.23□□□□□ -0.93
MRPL55-209ENST00000366735 WDR61Q9GZS3 305 aaKnown RBP9.23□□□□□ -0.93
MRPL55-209ENST00000366735 TIMM9Q9Y5J7 89 aa9.23□□□□□ -0.93
MRPL55-209ENST00000366735 SELENOKQ9Y6D0 94 aa9.23□□□□□ -0.93
MRPL55-209ENST00000366735 MPDU1O75352 247 aa9.22□□□□□ -0.93
MRPL55-209ENST00000366735 OR13C7P0DN81 318 aa9.22□□□□□ -0.93
MRPL55-209ENST00000366735 SUB1P53999 127 aaKnown RBP eCLIP9.22□□□□□ -0.93
MRPL55-209ENST00000366735 RNASEH2CQ8TDP1 164 aaKnown RBP9.22□□□□□ -0.93
MRPL55-209ENST00000366735 SH3BGRL3Q9H299 93 aa9.22□□□□□ -0.93
MRPL55-209ENST00000366735 WDR83OSQ9Y284 106 aa9.22□□□□□ -0.93
MRPL55-209ENST00000366735 NDUFA4O00483 81 aa9.21□□□□□ -0.94
MRPL55-209ENST00000366735 GPX4P36969 197 aaPredicted RBP9.21□□□□□ -0.94
MRPL55-209ENST00000366735 SERF2P84101 59 aa9.21□□□□□ -0.94
MRPL55-209ENST00000366735 SLC25A24Q6NUK1 477 aa9.21□□□□□ -0.94
MRPL55-209ENST00000366735 OR2G3Q8NGZ4 309 aa9.21□□□□□ -0.94
MRPL55-209ENST00000366735 OR1P1Q8NH06 330 aa9.21□□□□□ -0.94
MRPL55-209ENST00000366735 IGHV3-35A0A0C4DH35 117 aa9.2□□□□□ -0.94
MRPL55-209ENST00000366735 UBE2L5PA0A1B0GUS4 154 aa9.2□□□□□ -0.94
MRPL55-209ENST00000366735 OR2T8A6NH00 312 aa9.2□□□□□ -0.94
MRPL55-209ENST00000366735 CMC4P56277 68 aaPredicted RBP9.2□□□□□ -0.94
MRPL55-209ENST00000366735 BLOC1S1P78537 153 aa9.2□□□□□ -0.94
MRPL55-209ENST00000366735 DPPA3Q6W0C5 159 aa9.2□□□□□ -0.94
MRPL55-209ENST00000366735 RNF183Q96D59 192 aa9.2□□□□□ -0.94
MRPL55-209ENST00000366735 NPVFQ9HCQ7 196 aa9.2□□□□□ -0.94
MRPL55-209ENST00000366735 ZNF705EA8MWA4 302 aaPredicted RBP9.19□□□□□ -0.94
MRPL55-209ENST00000366735 K7EMT4 169 aa9.19□□□□□ -0.94
MRPL55-209ENST00000366735 CORTO00230 105 aa9.19□□□□□ -0.94
MRPL55-209ENST00000366735 RELQ04864 619 aaPredicted RBP9.19□□□□□ -0.94
MRPL55-209ENST00000366735 Q56UQ5 140 aa9.19□□□□□ -0.94
MRPL55-209ENST00000366735 C16orf54Q6UWD8 224 aa9.19□□□□□ -0.94
MRPL55-209ENST00000366735 SLC7A5P1Q8MH63 180 aa9.19□□□□□ -0.94
MRPL55-209ENST00000366735 PCNPQ8WW12 178 aaKnown RBP9.19□□□□□ -0.94
MRPL55-209ENST00000366735 C20orf24Q9BUV8 137 aa9.19□□□□□ -0.94
MRPL55-209ENST00000366735 C21orf62Q9NYP8 219 aa9.19□□□□□ -0.94
MRPL55-209ENST00000366735 F11RQ9Y624 299 aaKnown RBP9.19□□□□□ -0.94
MRPL55-209ENST00000366735 ATP6V1G1O75348 118 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 RPL35AP18077 110 aaKnown RBP9.18□□□□□ -0.94
MRPL55-209ENST00000366735 FGF7P21781 194 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 ODF3L2Q3SX64 289 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 TMEM182Q6ZP80 229 aaPredicted RBP9.18□□□□□ -0.94
MRPL55-209ENST00000366735 TMEM144Q7Z5S9 345 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 LYPD6BQ8NI32 183 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 RSG1Q9BU20 258 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 NPCDR1Q9BY65 106 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 KCNIP2Q9NS61 270 aa9.18□□□□□ -0.94
MRPL55-209ENST00000366735 C17orf112F2Z3M2 114 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 NUPL2O15504 423 aaKnown RBP9.17□□□□□ -0.94
MRPL55-209ENST00000366735 MBP02144 154 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 CD5P06127 495 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 OPRK1P41145 380 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 MFAP2P55001 183 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 RAB31Q13636 194 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 GAMTQ14353 236 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 AKR1C8PQ5T2L2 129 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 LGALS9CQ6DKI2 356 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 ETFRF1Q6IPR1 90 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 TEPPQ6URK8 271 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 ZNF709Q8N972 641 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 PHLDA1Q8WV24 401 aaPredicted RBP9.17□□□□□ -0.94
MRPL55-209ENST00000366735 SLC35E1Q96K37 410 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 MAP6D1Q9H9H5 199 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 RFNGQ9Y644 331 aa9.17□□□□□ -0.94
MRPL55-209ENST00000366735 SMCO3A2RU48 225 aa9.16□□□□□ -0.94
MRPL55-209ENST00000366735 CAMLGP49069 296 aa9.16□□□□□ -0.94
MRPL55-209ENST00000366735 PAFAH1B2P68402 229 aa9.16□□□□□ -0.94
MRPL55-209ENST00000366735 PXDC1Q5TGL8 231 aa9.16□□□□□ -0.94
MRPL55-209ENST00000366735 Q6ZRG5 221 aa9.16□□□□□ -0.94
MRPL55-209ENST00000366735 COMMD7Q86VX2 200 aa9.16□□□□□ -0.94
MRPL55-209ENST00000366735 EIF4E3Q8N5X7 224 aaKnown RBP9.16□□□□□ -0.94
MRPL55-209ENST00000366735 MGST2Q99735 147 aa9.16□□□□□ -0.94
MRPL55-209ENST00000366735 FNDC4Q9H6D8 234 aaPredicted RBP9.16□□□□□ -0.94
MRPL55-209ENST00000366735 FRAS1Q86XX4 4008 aa9.16□□□□□ -0.94
MRPL55-209ENST00000366735 TRAV1-1A0A0B4J248 108 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 RPL29P47914 159 aaKnown RBP9.15□□□□□ -0.94
MRPL55-209ENST00000366735 TCTAP57738 103 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 AKR1C1Q04828 323 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 TMEM41BQ5BJD5 291 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 THAP8Q8NA92 274 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 TMEM116Q8NCL8 245 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 FAM213BQ8TBF2 198 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 RARRES2Q99969 163 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 CSTL1Q9H114 145 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 C11orf68Q9H3H3 251 aaKnown RBP9.15□□□□□ -0.94
MRPL55-209ENST00000366735 RPRMQ9NS64 109 aa9.15□□□□□ -0.94
MRPL55-209ENST00000366735 IGHV7-4-1A0A0J9YVY3 117 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 RAB19A4D1S5 217 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 I3L2K1 104 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 AGPAT2O15120 278 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 ZNF207O43670 478 aaKnown RBP9.14□□□□□ -0.95
MRPL55-209ENST00000366735 YIF1AO95070 293 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 S100A1P23297 94 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 FHITP49789 147 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 MLANAQ16655 118 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 C11orf45Q8TAV5 145 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 TXN2Q99757 166 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 CHRDL1Q9BU40 450 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 SMPXQ9UHP9 88 aa9.14□□□□□ -0.95
MRPL55-209ENST00000366735 SLC45A2Q9UMX9 530 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms