RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 OR4X1Q8NH49 305 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 RNASE11Q8TAA1 199 aaKnown RBP3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 NARS2Q96I59 477 aaKnown RBP3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 RAB40CQ96S21 281 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 NDUFAF3Q9BU61 184 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 ENY2Q9NPA8 101 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 XCL2Q9UBD3 114 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 IGHV3OR16-12A0A075B7B8 117 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 C3orf85A0A1B0GTC6 90 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 INS-IGF2F8WCM5 200 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 HPGDSO60760 199 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 SCGB2A1O75556 95 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 APOA1P02647 267 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 IGLC1P0CG04 106 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 P0DMU3 169 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 FAM231AP0DMU4 169 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 FAM231CP0DMU5 169 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 ELK1P19419 428 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 EIF2B2P49770 351 aaKnown RBP3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 RND2P52198 227 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 FXYD7P58549 80 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 DEFB1P60022 68 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 RND3P61587 244 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 NCS1P62166 190 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 DHODHQ02127 395 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 USF2Q15853 346 aaPredicted RBP3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 KCTD21Q4G0X4 260 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 RNASE10Q5GAN6 216 aaKnown RBP3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 C16orf54Q6UWD8 224 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 LHFPL1Q86WI0 220 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 Q8WTZ3 238 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 YIPF6Q96EC8 236 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 COPZ2Q9P299 210 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 KLK11Q9UBX7 282 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 PKHD1P08F94 4074 aa3.67□□□□□ -1.82
RNU4-4P-201ENST00000364588 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 TRAV30A0A087WSZ9 112 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 CEBPZOSA8MTT3 80 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 FAM25AB3EWG3 89 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 FAM25CB3EWG5 89 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 FAM25GB3EWG6 89 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 H3BMM0 161 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 ATG12O94817 140 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 IFNA10P01566 189 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 CD3DP04234 171 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 IL4P05112 153 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 OR5AC1P0C628 307 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 SPART-AS1P0CW21 52 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 HTN3P15516 51 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 UCP1P25874 307 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 NPY1RP25929 384 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 OR10J1P30954 320 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 HTR2BP41595 481 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 RPL5P46777 297 aaKnown RBP3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 AP2S1P53680 142 aaPredicted RBP3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 SPCS3P61009 180 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 VBP1P61758 197 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 NUTF2P61970 127 aaKnown RBP3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 SNRPD3P62318 126 aaKnown RBP3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 MEF2DQ14814 521 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 BSXQ3C1V8 233 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 SCGB2B2Q4G0G5 96 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 GDF5OSQ5U4N7 250 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 PRSS54Q6PEW0 395 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 SIGLEC15Q6ZMC9 328 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 UBE2DNLQ8IWF7 75 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 CCDC71LQ8N9Z2 235 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 OR4D10Q8NGI6 311 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 OR1S2Q8NGQ3 325 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 OR13C8Q8NGS7 320 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 LHFPL5Q8TAF8 219 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 MARCH1Q8TCQ1 289 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 ZNF486Q96H40 463 aaPredicted RBP3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 ACY3Q96HD9 319 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 NACAE9PAV3 2078 aa3.66□□□□□ -1.82
RNU4-4P-201ENST00000364588 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 ZNF705FA8MVS1 300 aaPredicted RBP3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 H7C423 109 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 RAB3DO95716 219 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 IFNA21P01568 189 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 ZNF705DP0CH99 300 aaPredicted RBP3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 ZNF705BP0CI00 300 aaPredicted RBP3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 RD3LP0DJH9 198 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 SLC25A4P12235 298 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 HLA-DRB4P13762 266 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 YPEL3P61236 119 aaPredicted RBP3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 LGALS9BQ3B8N2 356 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 C2orf83Q53S99 150 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 FAM222AQ5U5X8 452 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 ZNF705AQ6ZN79 300 aaPredicted RBP3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 ARRDC1Q8N5I2 433 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 OR51G1Q8NGK1 321 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 TERB2Q8NHR7 220 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 ZFAND1Q8TCF1 268 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 RNASEH2CQ8TDP1 164 aaKnown RBP3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 GPR146Q96CH1 333 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 LINC00052Q96N35 136 aa3.65□□□□□ -1.83
RNU4-4P-201ENST00000364588 PYGO2Q9BRQ0 406 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms