RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 GAGE13Q4V321 117 aa16.53■□□□□ 0.24
SMURF1-202ENST00000361368 ITGB1BP1O14713 200 aa16.52■□□□□ 0.24
SMURF1-202ENST00000361368 KLF12Q9Y4X4 402 aa16.52■□□□□ 0.24
SMURF1-202ENST00000361368 VWC2LB2RUY7 222 aa16.52■□□□□ 0.24
SMURF1-202ENST00000361368 PCP4P48539 62 aa16.52■□□□□ 0.24
SMURF1-202ENST00000361368 DAD1P61803 113 aa16.52■□□□□ 0.24
SMURF1-202ENST00000361368 SAMD5Q5TGI4 173 aa16.52■□□□□ 0.24
SMURF1-202ENST00000361368 FAM110DQ8TAY7 271 aaPredicted RBP16.52■□□□□ 0.24
SMURF1-202ENST00000361368 NDUFAF3Q9BU61 184 aa16.52■□□□□ 0.24
SMURF1-202ENST00000361368 PNRC2Q9NPJ4 139 aaKnown RBP16.52■□□□□ 0.24
SMURF1-202ENST00000361368 GSN-AS1Q9NRJ2 163 aa16.52■□□□□ 0.23
SMURF1-202ENST00000361368 PTPRFP10586 1907 aa16.52■□□□□ 0.23
SMURF1-202ENST00000361368 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.23
SMURF1-202ENST00000361368 LYPD2Q6UXB3 125 aa16.52■□□□□ 0.23
SMURF1-202ENST00000361368 TRPT1Q86TN4 253 aaKnown RBP16.52■□□□□ 0.23
SMURF1-202ENST00000361368 MYOFQ9NZM1 2061 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 B3GALT5-AS1P59052 145 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 Q8TAT8 98 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 SCN8AQ9UQD0 1980 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 NPC2P61916 151 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 MEGF9Q9H1U4 602 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 TRAV13-1A0A0B4J241 112 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 CLPSP04118 112 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 MDC1Q14676 2089 aaKnown RBP16.51■□□□□ 0.23
SMURF1-202ENST00000361368 A6NNC1 897 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 J3QKU1 62 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 J3QLI3 93 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 ZNF562Q6V9R5 426 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 Q6ZS49 121 aa16.51■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BKO60814 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 NDUFB8O95169 186 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BJP06899 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BOP23527 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BBP33778 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BDP58876 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BCP62807 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST2H2BEQ16778 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BHQ93079 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BNQ99877 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H2BMQ99879 126 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 TIMM21Q9BVV7 248 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 LIME1Q9H400 295 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 ZNF561-AS1K7EIQ3 104 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 RPL32P62910 135 aaKnown RBP16.5■□□□□ 0.23
SMURF1-202ENST00000361368 ABCA7Q8IZY2 2146 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 INTS1Q8N201 2190 aaKnown RBP16.5■□□□□ 0.23
SMURF1-202ENST00000361368 ESPL1Q14674 2120 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 PRIMA1Q86XR5 153 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 SHANK2-AS3Q9BTD1 123 aa16.5■□□□□ 0.23
SMURF1-202ENST00000361368 IGHV1-69DA0A0B4J2H0 117 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 IGHV1-69P01742 117 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 APOC4P55056 127 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 OTOFQ9HC10 1997 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 ZDBF2Q9HCK1 2354 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 SPTBP11277 2137 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 LINC00473A8K010 186 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 SRSF3P84103 164 aaKnown RBP16.49■□□□□ 0.23
SMURF1-202ENST00000361368 RMI2Q96E14 147 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 RTTNQ86VV8 2226 aa16.49■□□□□ 0.23
SMURF1-202ENST00000361368 EP300Q09472 2414 aaPredicted RBP16.49■□□□□ 0.23
SMURF1-202ENST00000361368 F5H768 121 aa16.48■□□□□ 0.23
SMURF1-202ENST00000361368 RNASE2P10153 161 aaKnown RBP16.48■□□□□ 0.23
SMURF1-202ENST00000361368 LINC01551Q86U37 167 aa16.48■□□□□ 0.23
SMURF1-202ENST00000361368 SCN2AQ99250 2005 aa16.48■□□□□ 0.23
SMURF1-202ENST00000361368 ZNF236Q9UL36 1845 aa16.48■□□□□ 0.23
SMURF1-202ENST00000361368 Q96MF0 132 aa16.48■□□□□ 0.23
SMURF1-202ENST00000361368 FOXL2NBQ6ZUU3 175 aa16.47■□□□□ 0.23
SMURF1-202ENST00000361368 ANAPC13Q9BS18 74 aa16.47■□□□□ 0.23
SMURF1-202ENST00000361368 NTF4P34130 210 aa16.47■□□□□ 0.23
SMURF1-202ENST00000361368 HIST1H4AP62805 103 aaKnown RBP16.46■□□□□ 0.23
SMURF1-202ENST00000361368 RPP25LQ8N5L8 163 aaKnown RBP16.46■□□□□ 0.23
SMURF1-202ENST00000361368 NUP35Q8NFH5 326 aa16.46■□□□□ 0.23
SMURF1-202ENST00000361368 PSME4Q14997 1843 aa16.46■□□□□ 0.23
SMURF1-202ENST00000361368 ATRAIDQ6UW56 229 aa16.46■□□□□ 0.23
SMURF1-202ENST00000361368 CACNA1IQ9P0X4 2223 aa16.46■□□□□ 0.23
SMURF1-202ENST00000361368 GAGE2EQ4V326 116 aa16.46■□□□□ 0.23
SMURF1-202ENST00000361368 GAGE2DQ9UEU5 116 aa16.46■□□□□ 0.23
SMURF1-202ENST00000361368 A0A087WWL8 130 aa16.46■□□□□ 0.23
SMURF1-202ENST00000361368 RUSC1-AS1Q66K80 236 aa16.46■□□□□ 0.23
SMURF1-202ENST00000361368 PRB4P10163 310 aaPredicted RBP16.45■□□□□ 0.22
SMURF1-202ENST00000361368 GLRX5Q86SX6 157 aa16.45■□□□□ 0.22
SMURF1-202ENST00000361368 GFRA4Q9GZZ7 299 aa16.45■□□□□ 0.22
SMURF1-202ENST00000361368 TRBV25-1A0A075B6N4 114 aa16.45■□□□□ 0.22
SMURF1-202ENST00000361368 LY6HO94772 140 aa16.45■□□□□ 0.22
SMURF1-202ENST00000361368 TMEM158Q8WZ71 300 aa16.45■□□□□ 0.22
SMURF1-202ENST00000361368 BCL6BQ8N143 479 aaPredicted RBP16.45■□□□□ 0.22
SMURF1-202ENST00000361368 Q8TCH9 128 aa16.45■□□□□ 0.22
SMURF1-202ENST00000361368 SRSF4Q08170 494 aaKnown RBP16.44■□□□□ 0.22
SMURF1-202ENST00000361368 Q86TA4 180 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 ATP6V0E1O15342 81 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 YPEL3P61236 119 aaPredicted RBP16.44■□□□□ 0.22
SMURF1-202ENST00000361368 RALGAPA2Q2PPJ7 1873 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 MST1LQ2TV78 715 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 C2orf82Q6UX34 121 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 SIGMAR1Q99720 223 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 IGFL4Q6B9Z1 124 aa16.44■□□□□ 0.22
SMURF1-202ENST00000361368 IGHV2-70DA0A0C4DH43 119 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms