RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 C3orf79P0CE67 100 aa7.7□□□□□ -1.18
VPS13A-203ENST00000360280 PMS2P5A8MQ11 134 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 TREML4Q6UXN2 200 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 SPSB3Q6PJ21 355 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 FAM216BQ8N7L0 139 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 CD55P08174 381 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 OR11H6Q8NGC7 330 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 PRR19A6NJB7 356 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 C15orf32Q32M92 178 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 STPG1Q5TH74 334 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 C17orf100A8MU93 164 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 ZNF474Q6S9Z5 364 aaPredicted RBP7.69□□□□□ -1.18
VPS13A-203ENST00000360280 FCN3O75636 299 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 TMEM141Q96I45 108 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 ZNF319Q9P2F9 582 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 SCRT1Q9BWW7 348 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 TCF15Q12870 199 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 PDE6HQ13956 83 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 EXOC3-AS1Q8N2X6 119 aa7.69□□□□□ -1.18
VPS13A-203ENST00000360280 WNT2P09544 360 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 ZC2HC1BQ5TFG8 222 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 TRPT1Q86TN4 253 aaKnown RBP7.68□□□□□ -1.18
VPS13A-203ENST00000360280 TCF20Q9UGU0 1960 aaKnown RBP7.68□□□□□ -1.18
VPS13A-203ENST00000360280 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 TRGV9Q99603 122 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 PATE3B3GLJ2 98 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 PSG7Q13046 419 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 hADV29S1A0JD25 119 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 C5orf67F2Z3F1 127 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 TCRAP04437 139 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 THAP8Q8NA92 274 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 SLC25A28Q96A46 364 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 FBLN5Q9UBX5 448 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 EP300Q09472 2414 aaPredicted RBP7.68□□□□□ -1.18
VPS13A-203ENST00000360280 SH2D1AO60880 128 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 CRLF1O75462 422 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 C1orf53Q5VUE5 145 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 CHCHD2Q9Y6H1 151 aaPredicted RBP7.68□□□□□ -1.18
VPS13A-203ENST00000360280 SIP14410 1827 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 HAMPP81172 84 aa7.68□□□□□ -1.18
VPS13A-203ENST00000360280 ARHGAP21Q5T5U3 1957 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 A8MWP6 167 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 LY6G6FQ5SQ64 297 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 BOD1L2Q8IYS8 172 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 LIME1Q9H400 295 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 C1QCP02747 245 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 ANKRD29Q8N6D5 301 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 FDCSPQ8NFU4 85 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 TRAV13-1A0A0B4J241 112 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 RPL15P61313 204 aaKnown RBP7.67□□□□□ -1.18
VPS13A-203ENST00000360280 PYY3Q5JQD4 70 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 CEP192Q8TEP8 1941 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 TET1Q8NFU7 2136 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 BTCP35070 178 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 C5orf47Q569G3 176 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 GAGE12HA6NDE8 117 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 ACYP1P07311 99 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 SAP30O75446 220 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 HLA-DMBP28068 263 aa7.67□□□□□ -1.18
VPS13A-203ENST00000360280 IGHV1-24A0A0C4DH33 117 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 ID3Q02535 119 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 CDCP2Q5VXM1 449 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 IGKV1D-13A0A0B4J2D9 117 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 IGKV1-13P0DP09 117 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 TMEM75Q8N9X5 138 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 FGF6P10767 208 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 IGLV3-21P80748 117 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-203ENST00000360280 LCN12Q6JVE5 192 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 LCNL1Q6ZST4 164 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 SPTAN1Q13813 2472 aaKnown RBP7.66□□□□□ -1.18
VPS13A-203ENST00000360280 K7EP13 123 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 MRPS18CQ9Y3D5 142 aaKnown RBP7.66□□□□□ -1.18
VPS13A-203ENST00000360280 I3L3M4 83 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 TRAV25A0A0B4J276 109 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 C19orf48Q6RUI8 117 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 TMEM256Q8N2U0 113 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 TSSC4Q9Y5U2 329 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-203ENST00000360280 NDUFS6O75380 124 aaKnown RBP7.66□□□□□ -1.18
VPS13A-203ENST00000360280 FOXG1P55316 489 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-203ENST00000360280 TFF2Q03403 129 aa7.66□□□□□ -1.18
VPS13A-203ENST00000360280 FNDC10F2Z333 226 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 IL9P15248 144 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 AZU1P20160 251 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 IL17RELQ6ZVW7 336 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 SELENOKQ9Y6D0 94 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 WDR83OSQ9Y284 106 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 HCFC1P51610 2035 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 C3orf36Q3SXR2 165 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 SPSB2Q99619 263 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 A0A1W2PPM0 123 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 NDUFS5O43920 106 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 RFNGQ9Y644 331 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 FAM223BA6NKX1 122 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 FAM223AQ8IWN6 122 aa7.65□□□□□ -1.18
VPS13A-203ENST00000360280 TRAV13-2A0A0B4J235 113 aa7.65□□□□□ -1.19
VPS13A-203ENST00000360280 TP53TG1Q9Y2A0 90 aa7.65□□□□□ -1.19
VPS13A-203ENST00000360280 C14orf178Q8N769 122 aaPredicted RBP7.65□□□□□ -1.19
VPS13A-203ENST00000360280 LINC01560Q8TB33 94 aa7.65□□□□□ -1.19
VPS13A-203ENST00000360280 SHANK1Q9Y566 2161 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms