RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 GGCTO75223 188 aaKnown RBP17.8■□□□□ 0.44
SDF4-202ENST00000360001 SVBPQ8N300 66 aa17.8■□□□□ 0.44
SDF4-202ENST00000360001 C16orf95Q9H693 158 aa17.8■□□□□ 0.44
SDF4-202ENST00000360001 F6UZH7 168 aa17.8■□□□□ 0.44
SDF4-202ENST00000360001 H3BQ15 152 aa17.8■□□□□ 0.44
SDF4-202ENST00000360001 UNQ9165/PRO28630Q6UXU0 137 aa17.8■□□□□ 0.44
SDF4-202ENST00000360001 WIPF2Q8TF74 440 aaPredicted RBP17.8■□□□□ 0.44
SDF4-202ENST00000360001 BLNKQ8WV28 456 aa17.8■□□□□ 0.44
SDF4-202ENST00000360001 ZNF586Q9NXT0 402 aa17.8■□□□□ 0.44
SDF4-202ENST00000360001 HIST1H1EP10412 219 aaKnown RBP17.79■□□□□ 0.44
SDF4-202ENST00000360001 TCTEX1D4Q5JR98 221 aa17.79■□□□□ 0.44
SDF4-202ENST00000360001 C20orf24Q9BUV8 137 aa17.79■□□□□ 0.44
SDF4-202ENST00000360001 F8P00451 2351 aa17.79■□□□□ 0.44
SDF4-202ENST00000360001 CYSRT1A8MQ03 144 aa17.79■□□□□ 0.44
SDF4-202ENST00000360001 LGALS1P09382 135 aaKnown RBP17.79■□□□□ 0.44
SDF4-202ENST00000360001 IGLC2P0DOY2 106 aa17.79■□□□□ 0.44
SDF4-202ENST00000360001 S100A7P31151 101 aa17.79■□□□□ 0.44
SDF4-202ENST00000360001 ATRAIDQ6UW56 229 aa17.79■□□□□ 0.44
SDF4-202ENST00000360001 METTL26Q96S19 204 aa17.79■□□□□ 0.44
SDF4-202ENST00000360001 SCO2A0A1W2PP80 73 aa17.78■□□□□ 0.44
SDF4-202ENST00000360001 H3BTX0 84 aa17.78■□□□□ 0.44
SDF4-202ENST00000360001 ZNF207O43670 478 aaKnown RBP17.78■□□□□ 0.44
SDF4-202ENST00000360001 CRYBB3P26998 211 aa17.78■□□□□ 0.44
SDF4-202ENST00000360001 SUMO1P63165 101 aaKnown RBP17.78■□□□□ 0.44
SDF4-202ENST00000360001 RPUSD4Q96CM3 377 aaKnown RBP17.78■□□□□ 0.44
SDF4-202ENST00000360001 RNF24Q9Y225 148 aa17.78■□□□□ 0.44
SDF4-202ENST00000360001 BUB3O43684 328 aa17.77■□□□□ 0.44
SDF4-202ENST00000360001 CRLF1O75462 422 aa17.77■□□□□ 0.44
SDF4-202ENST00000360001 OR4F17Q8NGA8 305 aa17.77■□□□□ 0.44
SDF4-202ENST00000360001 LINC01006Q8NI28 216 aa17.77■□□□□ 0.44
SDF4-202ENST00000360001 PARLQ9H300 379 aa17.77■□□□□ 0.44
SDF4-202ENST00000360001 U3KQE9 123 aa17.77■□□□□ 0.44
SDF4-202ENST00000360001 APOHP02749 345 aaPredicted RBP17.77■□□□□ 0.43
SDF4-202ENST00000360001 MYCNOSP40205 109 aa17.77■□□□□ 0.43
SDF4-202ENST00000360001 RANP62826 216 aaKnown RBP17.77■□□□□ 0.43
SDF4-202ENST00000360001 TMEM190Q8WZ59 177 aa17.77■□□□□ 0.43
SDF4-202ENST00000360001 C11orf52Q96A22 123 aa17.77■□□□□ 0.43
SDF4-202ENST00000360001 NKX6-2Q9C056 277 aaPredicted RBP17.77■□□□□ 0.43
SDF4-202ENST00000360001 SCO1O75880 301 aa17.76■□□□□ 0.43
SDF4-202ENST00000360001 NDUFB4O95168 129 aa17.76■□□□□ 0.43
SDF4-202ENST00000360001 OR8I2Q8N0Y5 310 aa17.76■□□□□ 0.43
SDF4-202ENST00000360001 ELOVL1Q9BW60 279 aa17.76■□□□□ 0.43
SDF4-202ENST00000360001 RPL7P18124 248 aaKnown RBP17.75■□□□□ 0.43
SDF4-202ENST00000360001 C17orf77Q96MU5 243 aa17.75■□□□□ 0.43
SDF4-202ENST00000360001 TRBV19A0A075B6N1 114 aa17.75■□□□□ 0.43
SDF4-202ENST00000360001 ZNF727A8MUV8 499 aa17.75■□□□□ 0.43
SDF4-202ENST00000360001 ZNF674Q2M3X9 581 aa17.75■□□□□ 0.43
SDF4-202ENST00000360001 SMIM7Q9BQ49 75 aa17.75■□□□□ 0.43
SDF4-202ENST00000360001 NIPSNAP3BQ9BS92 247 aa17.75■□□□□ 0.43
SDF4-202ENST00000360001 DERL1Q9BUN8 251 aa17.75■□□□□ 0.43
SDF4-202ENST00000360001 TCF21O43680 179 aa17.74■□□□□ 0.43
SDF4-202ENST00000360001 NDUFA7O95182 113 aa17.74■□□□□ 0.43
SDF4-202ENST00000360001 SNAPINO95295 136 aa17.74■□□□□ 0.43
SDF4-202ENST00000360001 CDX1P47902 265 aaPredicted RBP17.74■□□□□ 0.43
SDF4-202ENST00000360001 GPHB5Q86YW7 130 aa17.74■□□□□ 0.43
SDF4-202ENST00000360001 CLRN3Q8NCR9 226 aa17.74■□□□□ 0.43
SDF4-202ENST00000360001 SMAD5-AS1Q9Y6J3 95 aa17.74■□□□□ 0.43
SDF4-202ENST00000360001 IGHV3OR16-13A0A075B7E8 117 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 IGHV3-49A0A0A0MS15 119 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 IGHV3-74A0A0B4J1X5 117 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 IGHV3-66A0A0C4DH42 116 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 FAM74A3Q4VXF1 159 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 C1orf194Q5T5A4 169 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 C18orf65Q6ZTR6 163 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 ZNF320A2RRD8 509 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 Q9H3A6 140 aa17.73■□□□□ 0.43
SDF4-202ENST00000360001 IGHV4OR15-8A0A075B7B6 117 aa17.72■□□□□ 0.43
SDF4-202ENST00000360001 A0A087WW49 117 aa17.72■□□□□ 0.43
SDF4-202ENST00000360001 RPEL1Q2QD12 228 aa17.72■□□□□ 0.43
SDF4-202ENST00000360001 FAM106AQ4KMX7 169 aa17.72■□□□□ 0.43
SDF4-202ENST00000360001 PGPA6NDG6 321 aa17.71■□□□□ 0.43
SDF4-202ENST00000360001 SLC17A3O00476 420 aa17.71■□□□□ 0.43
SDF4-202ENST00000360001 AWAT1Q58HT5 328 aa17.71■□□□□ 0.43
SDF4-202ENST00000360001 TVP23CQ96ET8 276 aa17.71■□□□□ 0.43
SDF4-202ENST00000360001 GPR82Q96P67 336 aa17.71■□□□□ 0.43
SDF4-202ENST00000360001 SETD2Q9BYW2 2564 aaPredicted RBP17.7■□□□□ 0.42
SDF4-202ENST00000360001 PDE6HQ13956 83 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 SIGLEC15Q6ZMC9 328 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 C2CD4CQ8TF44 421 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 C4orf3Q8WVX3 66 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 OTORQ9NRC9 128 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 M0R036 132 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 SRSF2Q01130 221 aaKnown RBP17.7■□□□□ 0.42
SDF4-202ENST00000360001 HIST2H2BDQ6DRA6 164 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 TCEAL7Q9BRU2 100 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 SDF2L1Q9HCN8 221 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 DAZ1Q9NQZ3 744 aaKnown RBP17.7■□□□□ 0.42
SDF4-202ENST00000360001 NAT8Q9UHE5 227 aa17.7■□□□□ 0.42
SDF4-202ENST00000360001 TMEM241Q24JQ0 296 aa17.69■□□□□ 0.42
SDF4-202ENST00000360001 TM4SF20Q53R12 229 aa17.69■□□□□ 0.42
SDF4-202ENST00000360001 KHDC1LQ5JSQ8 128 aa17.69■□□□□ 0.42
SDF4-202ENST00000360001 C16orf54Q6UWD8 224 aa17.69■□□□□ 0.42
SDF4-202ENST00000360001 EXOC3-AS1Q8N2X6 119 aa17.69■□□□□ 0.42
SDF4-202ENST00000360001 TRBV20OR9-2A0A075B6H5 130 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 K7EMT4 169 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 SLC25A5P05141 298 aaKnown RBP17.68■□□□□ 0.42
SDF4-202ENST00000360001 LYPD1Q8N2G4 141 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 GLMPQ8WWB7 406 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 EPDR1Q9UM22 224 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 A0A087X0K7 114 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms