RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 K7ENP7 123 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 SIAH2O43255 324 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 LY6HO94772 140 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 LIPFP07098 398 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 PMCHL1Q16048 86 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 KLHDC1Q8N7A1 406 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 IGFBPL1Q8WX77 278 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 GFRA4Q9GZZ7 299 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 CLEC5AQ9NY25 188 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 HILPDAQ9Y5L2 63 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 RELNP78509 3460 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 CHEK1O14757 476 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 IGLV2-11P01706 119 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 PRB4P10163 310 aaPredicted RBP6.8□□□□□ -1.32
RFX3-202ENST00000358730 HTR1DP28221 377 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 BPIFA4PQ86YQ2 179 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 OR4F17Q8NGA8 305 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 URB1-AS1Q96HZ7 61 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 RNF5Q99942 180 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 SRSF8Q9BRL6 282 aaKnown RBP6.8□□□□□ -1.32
RFX3-202ENST00000358730 SCNM1Q9BWG6 230 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 NBASA2RRP1 2371 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 SH2D7A6NKC9 451 aaPredicted RBP6.8□□□□□ -1.32
RFX3-202ENST00000358730 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 NBR2O15453 112 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 SHANK2-AS3Q9BTD1 123 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 TMEM208Q9BTX3 173 aa6.8□□□□□ -1.32
RFX3-202ENST00000358730 TRBV19A0A075B6N1 114 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 H3BRN7 92 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 HLA-DRB1P01911 266 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 IL4P05112 153 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 TFPI2P48307 235 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 ARF6P62330 175 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 KLRD1Q13241 179 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 COL5A1-AS1Q5SY13 56 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 FAM162BQ5T6X4 162 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 KIR3DL3Q8N743 410 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 RNF125Q96EQ8 232 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 C17orf77Q96MU5 243 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 S4R3C0 116 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 C2orf70A6NJV1 201 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 HES1Q14469 280 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 ZC2HC1AQ96GY0 325 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 ASCL2Q99929 193 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 DPM3Q9P2X0 92 aa6.79□□□□□ -1.32
RFX3-202ENST00000358730 IGHV1-24A0A0C4DH33 117 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 DLEU1O43261 78 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 HOXB4P17483 251 aaPredicted RBP6.78□□□□□ -1.32
RFX3-202ENST00000358730 KLF17Q5JT82 389 aaPredicted RBP6.78□□□□□ -1.32
RFX3-202ENST00000358730 SIGLEC15Q6ZMC9 328 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 LY6G5BQ8NDX9 201 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 TMEM70Q9BUB7 260 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 TRAV9-2A0A087WT02 112 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 LOC102724200A0A096LPH7 203 aaPredicted RBP6.78□□□□□ -1.32
RFX3-202ENST00000358730 A0A1W2PRD5 423 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 A0A1W2PRF3 423 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 A0A1W2PRM7 423 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 K7EQM0 130 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 FAM120AOSQ5T036 256 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 SPATA12Q7Z6I5 190 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 ZNF491Q8N8L2 437 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 TMEM75Q8N9X5 138 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 RNF24Q9Y225 148 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 LAMTOR2Q9Y2Q5 125 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 CEACAM3P40198 252 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 FBLN7Q53RD9 439 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 CFHR4Q92496 578 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 CHCHD1Q96BP2 118 aaKnown RBP6.78□□□□□ -1.32
RFX3-202ENST00000358730 TIMD4Q96H15 378 aa6.78□□□□□ -1.32
RFX3-202ENST00000358730 HAX1O00165 279 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 CCL21O00585 134 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 GNG7O60262 68 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 APOHP02749 345 aaPredicted RBP6.77□□□□□ -1.33
RFX3-202ENST00000358730 NPSP0C0P6 89 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 TSPOP30536 169 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 FCGR2BP31994 310 aaPredicted RBP6.77□□□□□ -1.33
RFX3-202ENST00000358730 OR11H6Q8NGC7 330 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 RAB1BQ9H0U4 201 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 PSG8Q9UQ74 426 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 CSMD1Q96PZ7 3565 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.77□□□□□ -1.33
RFX3-202ENST00000358730 TRBV6-1A0A0K0K1D8 114 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 A0A1B0GUT8 65 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 M0R3E3 92 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 NDUFA3O95167 84 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 IGLL1P15814 213 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 FBXL19-AS1Q494R0 122 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 STPG4Q8N801 248 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 NDFIP1Q9BT67 221 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 TPPP3Q9BW30 176 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 ZFP30Q9Y2G7 519 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 GOLT1BQ9Y3E0 138 aa6.77□□□□□ -1.33
RFX3-202ENST00000358730 WNK2Q9Y3S1 2297 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 C20orf202A1L168 122 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 ZNF785A8K8V0 405 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 ARMS2P0C7Q2 107 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms