RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 CACNA1DQ01668 2161 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 A0A1W2PRE2 83 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 PLP1P60201 277 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 ZNF415Q09FC8 603 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 DEFB114Q30KQ6 69 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 PRR27Q6MZM9 219 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 C19orf35Q6ZS72 473 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 ATG101Q9BSB4 218 aa7.06□□□□□ -1.28
UPF2-202ENST00000357604 ZNF727A8MUV8 499 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 GATCO43716 136 aaKnown RBP7.05□□□□□ -1.28
UPF2-202ENST00000357604 USF3Q68DE3 2245 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 RBFOX3A6NFN3 312 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 MT-ND4LP03901 98 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 CSN3P07498 182 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 BSXQ3C1V8 233 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 GOLT1AQ6ZVE7 132 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 BAGE2Q86Y30 109 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 UBE2DNLQ8IWF7 75 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 F8W036 122 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 ADIRFQ15847 76 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 Q6ZS46 218 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 A0A087X0K7 114 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 SSBP2P81877 361 aaPredicted RBP7.05□□□□□ -1.28
UPF2-202ENST00000357604 UQCC3Q6UW78 93 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 CSTL1Q9H114 145 aa7.05□□□□□ -1.28
UPF2-202ENST00000357604 PEX7O00628 323 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 ZFP30Q9Y2G7 519 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 DOPEY2Q9Y3R5 2298 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 ALPK2Q86TB3 2170 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 BCL2P10415 239 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 ZNF138P52744 262 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 BRWD1-AS2P59051 145 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 USP24Q9UPU5 2620 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 PMS2P5A8MQ11 134 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 ZNF705GA8MUZ8 300 aaPredicted RBP7.04□□□□□ -1.28
UPF2-202ENST00000357604 PRR25Q96S07 402 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 FNDC4Q9H6D8 234 aaPredicted RBP7.04□□□□□ -1.28
UPF2-202ENST00000357604 RBAKDNA6NC62 111 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 PAX9P55771 341 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 MLANAQ16655 118 aa7.04□□□□□ -1.28
UPF2-202ENST00000357604 SPRY2O43597 315 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 FHITP49789 147 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 ERVFC1-1P60608 527 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 RAB4BP61018 213 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 C9orf62Q8N4C0 152 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 CXorf65A6NEN9 183 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 TRBV12-3P01733 135 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 FAM162BQ5T6X4 162 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 C10orf99Q6UWK7 81 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 PRIMA1Q86XR5 153 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 ARL6IP6Q8N6S5 226 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 C20orf144Q9BQM9 153 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 NAT8Q9UHE5 227 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 VSIRQ9H7M9 311 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 ZNF331Q9NQX6 463 aaPredicted RBP7.03□□□□□ -1.28
UPF2-202ENST00000357604 TRGV2A0A075B6R0 118 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 F5H697 171 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 H3BTX0 84 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 KIAA0141Q14154 515 aaPredicted RBP7.03□□□□□ -1.28
UPF2-202ENST00000357604 EPDR1Q9UM22 224 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 CHD8Q9HCK8 2581 aa7.03□□□□□ -1.28
UPF2-202ENST00000357604 STAG3L2P0CL84 134 aa7.02□□□□□ -1.28
UPF2-202ENST00000357604 STAG3L3P0CL85 134 aa7.02□□□□□ -1.28
UPF2-202ENST00000357604 RIGQ13278 110 aa7.02□□□□□ -1.28
UPF2-202ENST00000357604 USF2Q15853 346 aaPredicted RBP7.02□□□□□ -1.28
UPF2-202ENST00000357604 TMEM241Q24JQ0 296 aa7.02□□□□□ -1.28
UPF2-202ENST00000357604 TVP23CQ96ET8 276 aa7.02□□□□□ -1.28
UPF2-202ENST00000357604 SLC25A2Q9BXI2 301 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 BOLA1Q9Y3E2 137 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 PHLDA3Q9Y5J5 127 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 PKDREJQ9NTG1 2253 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 DOPEY1Q5JWR5 2465 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 E7EUB6 86 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 H0YIZ8 118 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 SNAPINO95295 136 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 TAS2R60P59551 318 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 NEU1Q99519 415 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 TLN1Q9Y490 2541 aaKnown RBP7.02□□□□□ -1.29
UPF2-202ENST00000357604 ICE1Q9Y2F5 2266 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 TRBV19A0A075B6N1 114 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 KIR2DL5BA0A0G2JN68 375 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 KIR2DL5BA0A0G2JPC4 375 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 SPANXN1Q5VSR9 72 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 TEX261Q6UWH6 196 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 KIR2DL5AQ8N109 375 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 KIR2DL5BQ8NHK3 375 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 ARFGEF3Q5TH69 2177 aa7.02□□□□□ -1.29
UPF2-202ENST00000357604 KNCNA6PVL3 124 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 H7C1H1 209 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 TMEM75Q8N9X5 138 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 WFDC1Q9HC57 220 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 PCNX1Q96RV3 2341 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 TRGC1P0CF51 173 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 PYYP10082 97 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 EMP1P54849 157 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 DAD1P61803 113 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 CACNG7P62955 275 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 GLMPQ8WWB7 406 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 RARRES2Q99969 163 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 MAP6D1Q9H9H5 199 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms