RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 NPFFO15130 113 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 TOMM40O96008 361 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGKV2D-40P01614 121 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 PDLIM4P50479 330 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 MDS2Q8NDY4 140 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGLV3-1P01715 115 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 ATP5J2P56134 94 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 TPTE2P1Q5T6R2 138 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGHV2-26A0A0B4J1V2 119 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 TRAV8-2A0A0B4J237 113 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 DUX5Q96PT3 197 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 CHTOPQ9Y3Y2 248 aaKnown RBP12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 GTF3C1Q12789 2109 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 ITGB1BP1O14713 200 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGHV3-11P01762 117 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 FXYD7P58549 80 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 ZNF329Q86UD4 541 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 ZNF114Q8NC26 417 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 Q5PR19 223 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 PLXNA2O75051 1894 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 THSD7BQ9C0I4 1608 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 ARFGEF3Q5TH69 2177 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
TRAPPC11-202ENST00000357207 GLMPQ8WWB7 406 aa12.71□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGHV1-3A0A0C4DH29 117 aa12.71□□□□□ -0.38
TRAPPC11-202ENST00000357207 TSPAN13O95857 204 aa12.71□□□□□ -0.38
TRAPPC11-202ENST00000357207 WNT2P09544 360 aa12.71□□□□□ -0.38
TRAPPC11-202ENST00000357207 NPSP0C0P6 89 aa12.71□□□□□ -0.38
TRAPPC11-202ENST00000357207 VDAC2P45880 294 aaPredicted RBP12.71□□□□□ -0.38
TRAPPC11-202ENST00000357207 GAFA1Q96PS6 74 aa12.71□□□□□ -0.38
TRAPPC11-202ENST00000357207 TMEM178BH3BS89 294 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 LYPD1Q8N2G4 141 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 CD7P09564 240 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 KLRB1Q12918 225 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 KIR3DS1Q14943 382 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 LAGE3Q14657 143 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 CD300EQ496F6 205 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 PROK2Q9HC23 129 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 TMEM14BQ9NUH8 114 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 IGKV3OR2-268A0A0C4DH90 116 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 ZC2HC1BQ5TFG8 222 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 C10orf126Q8N4M7 172 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 RNF5Q99942 180 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 SIGLEC9Q9Y336 463 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 MOB4Q9Y3A3 225 aa12.7□□□□□ -0.38
TRAPPC11-202ENST00000357207 COL4A6Q14031 1691 aa12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 CD59P13987 128 aa12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 RPL15P61313 204 aaKnown RBP12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 V9GYV3 84 aa12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 PSG3Q16557 428 aa12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 CDPF1Q6NVV7 123 aa12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 AMN1Q8IY45 258 aa12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 A8MWV9 139 aa12.69□□□□□ -0.38
TRAPPC11-202ENST00000357207 CENPVQ7Z7K6 275 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 TMEM262E9PQX1 116 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 SH2D1AO60880 128 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 Q86TA4 180 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 OR13C6PQ8NH95 151 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 GFRA4Q9GZZ7 299 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 H3BRM9 83 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 Q8TAT8 98 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 GGTLC3B5MD39 225 aa12.68□□□□□ -0.38
TRAPPC11-202ENST00000357207 FAM231BA6NCW3 169 aa12.67□□□□□ -0.38
TRAPPC11-202ENST00000357207 LINC01549A6NIU2 74 aa12.67□□□□□ -0.38
TRAPPC11-202ENST00000357207 LYPD6Q86Y78 171 aa12.67□□□□□ -0.38
TRAPPC11-202ENST00000357207 TEX29Q8N6K0 151 aa12.67□□□□□ -0.38
TRAPPC11-202ENST00000357207 A0A1W2PPI3 338 aa12.67□□□□□ -0.38
TRAPPC11-202ENST00000357207 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
TRAPPC11-202ENST00000357207 COA6Q5JTJ3 125 aaKnown RBP12.67□□□□□ -0.38
TRAPPC11-202ENST00000357207 SLAQ13239 276 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 C11orf52Q96A22 123 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 C15orf32Q32M92 178 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 TRAV2A0A0B4J234 112 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 ZNF672Q499Z4 452 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 CT83Q5H943 113 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 WDR86Q86TI4 376 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 STPG4Q8N801 248 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 ZNF492Q9P255 531 aa12.66□□□□□ -0.38
TRAPPC11-202ENST00000357207 IGHG3P01860 377 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 IGLL1P15814 213 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 Q8NFD4 153 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 FAM231DQ6ZW35 169 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 TMEM158Q8WZ71 300 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 PAX8Q06710 450 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 SMKR1H3BMG3 65 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 OVOL1O14753 267 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 PLNP26678 52 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 PYGO2Q9BRQ0 406 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 CST9LQ9H4G1 147 aa12.65□□□□□ -0.38
TRAPPC11-202ENST00000357207 ATRXP46100 2492 aa12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
TRAPPC11-202ENST00000357207 ZNRD1Q9P1U0 126 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms