RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 HYLS1Q96M11 299 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 RNF2Q99496 336 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 ATP5SQ99766 215 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 NIT2Q9NQR4 276 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 SMAD5-AS1Q9Y6J3 95 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 C2orf70A6NJV1 201 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 ZNF785A8K8V0 405 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 SEC14L6B5MCN3 397 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 KRBOX1C9JBD0 128 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 OVOL1O14753 267 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 HMGB3O15347 200 aaKnown RBP3.04□□□□□ -1.92
LIG4-201ENST00000356922 FOLR2P14207 255 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 DEFB1P60022 68 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 KRTAP10-11P60412 298 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 CYP2G1PQ6ZSU1 146 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 OR8I2Q8N0Y5 310 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 ASB13Q8WXK3 278 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 TMEM190Q8WZ59 177 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 TRGV9Q99603 122 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 TXN2Q99757 166 aa3.04□□□□□ -1.92
LIG4-201ENST00000356922 MRPL27Q9P0M9 148 aaKnown RBP3.04□□□□□ -1.92
LIG4-201ENST00000356922 H3BTX0 84 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 TOMM40O96008 361 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 YPEL3P61236 119 aaPredicted RBP3.03□□□□□ -1.92
LIG4-201ENST00000356922 PAFAH1B2P68402 229 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 ZNF726P1Q15940 193 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 DEFB121Q5J5C9 76 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 SPSB3Q6PJ21 355 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 RPP25LQ8N5L8 163 aaKnown RBP3.03□□□□□ -1.92
LIG4-201ENST00000356922 FAM24BQ8N5W8 94 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 PFDN5Q99471 154 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 GGACTQ9BVM4 153 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 SCRT1Q9BWW7 348 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 UBQLN2Q9UHD9 624 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 UFC1Q9Y3C8 167 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 LYSTQ99698 3801 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 A0A1B0GV50 99 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 A0A1W2PS18 150 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 NDUFA4O00483 81 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 BUB3O43684 328 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 S100A8P05109 93 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 SMIM6P0DI80 62 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 MYCNOSP40205 109 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 RAB4BP61018 213 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 ATP6V1FQ16864 119 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 MAJINQ3KP22 176 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 AKR1C8PQ5T2L2 129 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 IGFL4Q6B9Z1 124 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 GBGT1Q8N5D6 347 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 PCNPQ8WW12 178 aaKnown RBP3.03□□□□□ -1.92
LIG4-201ENST00000356922 RNF125Q96EQ8 232 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 ZNF503Q96F45 646 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 ARV1Q9H2C2 271 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 SLC25A32Q9H2D1 315 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 TMEM231Q9H6L2 316 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 GSN-AS1Q9NRJ2 163 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 KCNIP2Q9NS61 270 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 PXMP4Q9Y6I8 212 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 U3KQE9 123 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 CHEK1O14757 476 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 CRYBB3P26998 211 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 G0S2P27469 103 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 RAB2AP61019 212 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 ZNF345Q14585 488 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 OPCMLQ14982 345 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 CD300EQ496F6 205 aaPredicted RBP3.03□□□□□ -1.92
LIG4-201ENST00000356922 FAM74A1Q5RGS3 127 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 EIF5AL1Q6IS14 154 aaKnown RBP3.03□□□□□ -1.92
LIG4-201ENST00000356922 STXBP6Q8NFX7 210 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 TCEAL7Q9BRU2 100 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 RHPN1-AS1Q9BWJ2 59 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 RPRMQ9NS64 109 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 SLC39A9Q9NUM3 307 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 PGPEP1Q9NXJ5 209 aa3.03□□□□□ -1.92
LIG4-201ENST00000356922 FNDC10F2Z333 226 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 HYPMO75409 117 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 C8orf88P0DMB2 117 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 DEFB114Q30KQ6 69 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 FAM90A2PQ658T7 463 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 MIR17HGQ75NE6 70 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 TMEM61Q8N0U2 210 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 TMED6Q8WW62 240 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 MCRIP2Q9BUT9 160 aaKnown RBP3.03□□□□□ -1.93
LIG4-201ENST00000356922 WFDC10AQ9H1F0 79 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 SMPXQ9UHP9 88 aa3.03□□□□□ -1.93
LIG4-201ENST00000356922 A0A0D9SG52 128 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 A8MWP6 167 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 H3BQ15 152 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 LGALS9O00182 355 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 MRPS12O15235 138 aaKnown RBP3.02□□□□□ -1.93
LIG4-201ENST00000356922 BCL2L11O43521 198 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 OR7C2O60412 319 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 MBP02144 154 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 RPL29P47914 159 aaKnown RBP3.02□□□□□ -1.93
LIG4-201ENST00000356922 SELENOTP62341 195 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 CLLU1Q5K131 121 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 LINC00305Q7Z4B0 112 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 OR2G3Q8NGZ4 309 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 FAM167A-AS1Q96KT0 104 aa3.02□□□□□ -1.93
LIG4-201ENST00000356922 SLC25A39Q9BZJ4 359 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms