RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 EIF5AP63241 154 aaKnown RBP11.68□□□□□ -0.54
TRIM13-201ENST00000356017 OR2G3Q8NGZ4 309 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 SCRT1Q9BWW7 348 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 CYTL1Q9NRR1 136 aa11.68□□□□□ -0.54
TRIM13-201ENST00000356017 IGKV3-7A0A075B6H7 116 aa11.67□□□□□ -0.54
TRIM13-201ENST00000356017 C4BPBP20851 252 aa11.67□□□□□ -0.54
TRIM13-201ENST00000356017 ACOT6Q3I5F7 207 aaPredicted RBP11.67□□□□□ -0.54
TRIM13-201ENST00000356017 LGALSLQ3ZCW2 172 aaPredicted RBP11.67□□□□□ -0.54
TRIM13-201ENST00000356017 MS4A6AQ9H2W1 248 aa11.67□□□□□ -0.54
TRIM13-201ENST00000356017 MBP02144 154 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 M6PRP20645 277 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 FAM78BQ5VT40 261 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 LEMD1Q68G75 181 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 BPIFA4PQ86YQ2 179 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 GBGT1Q8N5D6 347 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 STXBP6Q8NFX7 210 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 ZNF471Q9BX82 626 aaPredicted RBP11.66□□□□□ -0.54
TRIM13-201ENST00000356017 MRPL32Q9BYC8 188 aaKnown RBP11.66□□□□□ -0.54
TRIM13-201ENST00000356017 SLC25A32Q9H2D1 315 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 NRN1Q9NPD7 142 aa11.66□□□□□ -0.54
TRIM13-201ENST00000356017 CMC4P56277 68 aaPredicted RBP11.65□□□□□ -0.54
TRIM13-201ENST00000356017 GCSAMLQ5JQS6 135 aa11.65□□□□□ -0.54
TRIM13-201ENST00000356017 SAMD13Q5VXD3 122 aa11.65□□□□□ -0.54
TRIM13-201ENST00000356017 PRR25Q96S07 402 aa11.65□□□□□ -0.54
TRIM13-201ENST00000356017 TFPI2P48307 235 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 MEOX2P50222 304 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 RHOBP62745 196 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 SEPSECSQ9HD40 501 aaKnown RBP11.64□□□□□ -0.55
TRIM13-201ENST00000356017 AURKAIP1Q9NWT8 199 aaPredicted RBP11.64□□□□□ -0.55
TRIM13-201ENST00000356017 CD81P60033 236 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 DCANP1Q8TF63 244 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 FAM110AQ9BQ89 295 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 SH3BGRL3Q9H299 93 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 FUT9Q9Y231 359 aa11.64□□□□□ -0.55
TRIM13-201ENST00000356017 A0A1W2PPV4 95 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 K7EQG2 157 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 SPP1P10451 314 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 TPT1P13693 172 aaKnown RBP11.63□□□□□ -0.55
TRIM13-201ENST00000356017 ATF4P18848 351 aaPredicted RBP11.63□□□□□ -0.55
TRIM13-201ENST00000356017 MORN5Q5VZ52 161 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 C9orf62Q8N4C0 152 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 OR10G4Q8NGN3 311 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 OR10G9Q8NGN4 311 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 OR10G7Q8NGN6 311 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 RFNGQ9Y644 331 aa11.63□□□□□ -0.55
TRIM13-201ENST00000356017 CD7P09564 240 aa11.62□□□□□ -0.55
TRIM13-201ENST00000356017 TAS2R45P59539 299 aa11.62□□□□□ -0.55
TRIM13-201ENST00000356017 SNRPD3P62318 126 aaKnown RBP11.62□□□□□ -0.55
TRIM13-201ENST00000356017 BAP18Q8IXM2 172 aa11.62□□□□□ -0.55
TRIM13-201ENST00000356017 STOML3Q8TAV4 291 aa11.62□□□□□ -0.55
TRIM13-201ENST00000356017 TMEM14CQ9P0S9 112 aa11.62□□□□□ -0.55
TRIM13-201ENST00000356017 SMAD5-AS1Q9Y6J3 95 aa11.62□□□□□ -0.55
TRIM13-201ENST00000356017 TRAV5A0A0B4J249 113 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 PRB2P02812 416 aaPredicted RBP11.61□□□□□ -0.55
TRIM13-201ENST00000356017 SEC11BP0C7V7 166 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 ID1P41134 155 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 RAB2AP61019 212 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 DEFA6Q01524 100 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 TMEM41BQ5BJD5 291 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 AKR1C8PQ5T2L2 129 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 MIR17HGQ75NE6 70 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 SLC51BQ86UW2 128 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 SORL1Q92673 2214 aa11.61□□□□□ -0.55
TRIM13-201ENST00000356017 A0A087X0K7 114 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 MRPS12O15235 138 aaKnown RBP11.6□□□□□ -0.55
TRIM13-201ENST00000356017 GUK1Q16774 197 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 KHDC3LQ587J8 217 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 EIF5AL1Q6IS14 154 aaKnown RBP11.6□□□□□ -0.55
TRIM13-201ENST00000356017 Q8N1Y9 231 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 HRH4Q9H3N8 390 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 OR11H12B2RN74 326 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 ISLRO14498 428 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 SPATA31B1PQ5VZV4 182 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 RPP25LQ8N5L8 163 aaKnown RBP11.6□□□□□ -0.55
TRIM13-201ENST00000356017 LRRC20Q8TCA0 184 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 SLC25A2Q9BXI2 301 aa11.6□□□□□ -0.55
TRIM13-201ENST00000356017 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
TRIM13-201ENST00000356017 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 UMAD1C9J7I0 102 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 RGS13O14921 159 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 IGLC2P0DOY2 106 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 CDC34P49427 236 aaPredicted RBP11.59□□□□□ -0.55
TRIM13-201ENST00000356017 PSMB3P49720 205 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 ODF3L2Q3SX64 289 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 FAM122CQ6P4D5 195 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 LCN15Q6UWW0 184 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 FAM167A-AS1Q96KT0 104 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 OR51M1Q9H341 326 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 RPRMQ9NS64 109 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 NOTCH1P46531 2555 aa11.59□□□□□ -0.55
TRIM13-201ENST00000356017 K7EIL1 84 aa11.58□□□□□ -0.56
TRIM13-201ENST00000356017 SOCS3O14543 225 aa11.58□□□□□ -0.56
TRIM13-201ENST00000356017 OR7C2O60412 319 aa11.58□□□□□ -0.56
TRIM13-201ENST00000356017 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
TRIM13-201ENST00000356017 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
TRIM13-201ENST00000356017 PQLC2Q6ZP29 291 aa11.58□□□□□ -0.56
TRIM13-201ENST00000356017 PAXXQ9BUH6 204 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms