RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 NRGNQ92686 78 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 OOEPA6NGQ2 149 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 RIGQ13278 110 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 FAM159AQ6UWV7 190 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
RTN3-205ENST00000356000 RIF1Q5UIP0 2472 aaKnown RBP12.6□□□□□ -0.39
RTN3-205ENST00000356000 CEP192Q8TEP8 1941 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 KMT2BQ9UMN6 2715 aaPredicted RBP12.59□□□□□ -0.39
RTN3-205ENST00000356000 IGHV1OR15-9A0A0B4J2B8 117 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 LOC389332A0A1B0GUA5 103 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 C15orf61A6NNL5 157 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 SCGB2A1O75556 95 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 FOXC1Q12948 553 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 RAB9BQ9NP90 201 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 CNTRLQ7Z7A1 2325 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 ZNHIT1O43257 154 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 SS18L1O75177 396 aaPredicted RBP12.59□□□□□ -0.39
RTN3-205ENST00000356000 FXYD5Q96DB9 178 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 SRXN1Q9BYN0 137 aa12.59□□□□□ -0.39
RTN3-205ENST00000356000 PROP1O75360 226 aa12.58□□□□□ -0.39
RTN3-205ENST00000356000 ARMS2P0C7Q2 107 aa12.58□□□□□ -0.39
RTN3-205ENST00000356000 FXYD7P58549 80 aa12.58□□□□□ -0.39
RTN3-205ENST00000356000 TMEM126AQ9H061 195 aa12.58□□□□□ -0.39
RTN3-205ENST00000356000 ENY2Q9NPA8 101 aa12.58□□□□□ -0.39
RTN3-205ENST00000356000 A0A0J9YW62 118 aa12.58□□□□□ -0.4
RTN3-205ENST00000356000 HSPE1P61604 102 aaKnown RBP12.58□□□□□ -0.4
RTN3-205ENST00000356000 ZNF766Q5HY98 468 aa12.58□□□□□ -0.4
RTN3-205ENST00000356000 AAED1Q7RTV5 226 aa12.58□□□□□ -0.4
RTN3-205ENST00000356000 FMC1Q96HJ9 113 aa12.58□□□□□ -0.4
RTN3-205ENST00000356000 FBXL15Q9H469 300 aa12.58□□□□□ -0.4
RTN3-205ENST00000356000 U3KQK5 164 aa12.58□□□□□ -0.4
RTN3-205ENST00000356000 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
RTN3-205ENST00000356000 PRR30Q53SZ7 412 aaPredicted RBP12.58□□□□□ -0.4
RTN3-205ENST00000356000 Q8IYB0 196 aa12.58□□□□□ -0.4
RTN3-205ENST00000356000 AGRNO00468 2067 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 TRBV7-3A0A075B6L6 115 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 LINC01548A6NM66 108 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 DKK1O94907 266 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 PLGLB1Q02325 96 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 MEIG1Q5JSS6 88 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 SBSPONQ8IVN8 264 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 DEFB124Q8NES8 71 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 FOXA2Q9Y261 457 aaPredicted RBP12.57□□□□□ -0.4
RTN3-205ENST00000356000 SNCGO76070 127 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 COL8A1P27658 744 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 ZNF714Q96N38 554 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 HIST1H4GQ99525 98 aa12.57□□□□□ -0.4
RTN3-205ENST00000356000 TRAV4A0A0B4J268 109 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 IGKCP01834 107 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 ASIPP42127 132 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 GTSCR1Q86UQ5 136 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 SCNM1Q9BWG6 230 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 TMEM14BQ9NUH8 114 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 A0A1W2PQF6 199 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 HOXA3O43365 443 aaPredicted RBP12.56□□□□□ -0.4
RTN3-205ENST00000356000 PSPNO60542 156 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 IL4P05112 153 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 MYOD1P15172 320 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 ZNF493Q6ZR52 646 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 MAPKAPK5-AS1Q8N8E1 139 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 OCIAD1Q9NX40 245 aa12.56□□□□□ -0.4
RTN3-205ENST00000356000 IGHV3-43A0A0B4J1X8 118 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 PGPA6NDG6 321 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 D6R8Y8 96 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 WIPF1O43516 503 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 CFIP05156 583 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 IGHV3-43DP0DP04 118 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 CD59P13987 128 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 MBNL2Q5VZF2 373 aaKnown RBP12.55□□□□□ -0.4
RTN3-205ENST00000356000 F5P12259 2224 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 LILRA5A6NI73 299 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 LINC01619G3V211 115 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 PSMB2P49721 201 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 PPP1R27Q86WC6 154 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 PDPNQ86YL7 162 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 PRNDQ9UKY0 176 aa12.55□□□□□ -0.4
RTN3-205ENST00000356000 C5orf42Q9H799 3197 aa12.54□□□□□ -0.4
RTN3-205ENST00000356000 DEFB108AA8MXU0 73 aa12.54□□□□□ -0.4
RTN3-205ENST00000356000 RASL10AQ92737 203 aa12.54□□□□□ -0.4
RTN3-205ENST00000356000 AKIRIN1Q9H9L7 192 aaPredicted RBP12.54□□□□□ -0.4
RTN3-205ENST00000356000 MDFICQ9P1T7 246 aa12.54□□□□□ -0.4
RTN3-205ENST00000356000 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.54□□□□□ -0.4
RTN3-205ENST00000356000 FSTL3O95633 263 aa12.54□□□□□ -0.4
RTN3-205ENST00000356000 ZC2HC1BQ5TFG8 222 aa12.54□□□□□ -0.4
RTN3-205ENST00000356000 C10orf113Q5VZT2 155 aa12.54□□□□□ -0.4
RTN3-205ENST00000356000 SPTBN4Q9H254 2564 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 TRAV25A0A0B4J276 109 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 COX7A2P2O60397 106 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 ADIPOQQ15848 244 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 WFDC3Q8IUB2 231 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 PRRG4Q9BZD6 226 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 CHCHD2Q9Y6H1 151 aaPredicted RBP12.53□□□□□ -0.4
RTN3-205ENST00000356000 CRLF1O75462 422 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 ZFAND5O76080 213 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 FCER1GP30273 86 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 OR1L4Q8NGR5 311 aa12.53□□□□□ -0.4
RTN3-205ENST00000356000 SPTY2D1-AS1A0A0U1RR47 76 aa12.52□□□□□ -0.4
RTN3-205ENST00000356000 DNPH1O43598 174 aa12.52□□□□□ -0.4
RTN3-205ENST00000356000 MLANAQ16655 118 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms