RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ABHD5Q8WTS1 349 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 C17orf50Q8WW18 174 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 CITED2Q99967 270 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-201ENST00000355766 SLC25A33Q9BSK2 321 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 SCRT1Q9BWW7 348 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 SLC35B3Q9H1N7 401 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 FNDC4Q9H6D8 234 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-201ENST00000355766 TRGV11A0A075B6L2 103 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 IGKV1OR2-108A0A075B7D4 117 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 A0A1W2PPV4 95 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 RBFOX3A6NFN3 312 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 H3BUX3 64 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 K7EIM0 57 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 FCN1O00602 326 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 CLN5O75503 358 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 YIF1AO95070 293 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 IGHG2P01859 326 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 IGLC1P0CG04 106 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 RND2P52198 227 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 YPEL3P61236 119 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-201ENST00000355766 NDPQ00604 133 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 PRB3Q04118 309 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-201ENST00000355766 ZNF726P1Q15940 193 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 FAM74A3Q4VXF1 159 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 CYP2G1PQ6ZSU1 146 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 NECAP1Q8NC96 275 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 BPIFCQ8NFQ6 507 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 PIFOQ8TCI5 191 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 WIPF2Q8TF74 440 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-201ENST00000355766 PCNPQ8WW12 178 aaKnown RBP5.37□□□□□ -1.55
VPS13A-201ENST00000355766 RAB24Q969Q5 203 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 NKX6-2Q9C056 277 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-201ENST00000355766 NPFFR1Q9GZQ6 430 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 TMEM167BQ9NRX6 74 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 VAX2Q9UIW0 290 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 FUT9Q9Y231 359 aa5.37□□□□□ -1.55
VPS13A-201ENST00000355766 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 TRBV9A0A0B4J1U6 114 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 LOC102723971A0A1B0GUV8 181 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 PSMB11A5LHX3 300 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 FAM223BA6NKX1 122 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 ZFP92A6NM28 416 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 AP4M1O00189 453 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 PDE6DO43924 150 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 SNAPINO95295 136 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 OR2C1O95371 312 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 SFTA3P0C7M3 94 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 LINC00869P0C866 280 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 OR10J1P30954 320 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 HOXD3P31249 432 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-201ENST00000355766 MFAP2P55001 183 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 MEF2BQ02080 365 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-201ENST00000355766 PNRC1Q12796 327 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-201ENST00000355766 LY6EQ16553 131 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 ASPHD1Q5U4P2 390 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 MIC13Q5XKP0 118 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 SLC35E3Q7Z769 313 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 FAM223AQ8IWN6 122 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 NARS2Q96I59 477 aaKnown RBP5.36□□□□□ -1.55
VPS13A-201ENST00000355766 LINC00052Q96N35 136 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 SSX3Q99909 188 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 EIF5A2Q9GZV4 153 aaKnown RBP5.36□□□□□ -1.55
VPS13A-201ENST00000355766 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 SERTAD4Q9NUC0 356 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 C21orf62Q9NYP8 219 aa5.36□□□□□ -1.55
VPS13A-201ENST00000355766 TECRQ9NZ01 308 aaKnown RBP5.36□□□□□ -1.55
VPS13A-201ENST00000355766 STARD9Q9P2P6 4700 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 IGKV1D-37A0A075B6S9 117 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 TRBV7-1A0A0A6YYK4 115 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 F6UZH7 168 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 ATP6V0E1O15342 81 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 COX7A2P2O60397 106 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 NDUFB8O95169 186 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 TOMM40O96008 361 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 PF4V1P10720 104 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 RAB9AP51151 201 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 MFAP4P55083 255 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 FAM122CQ6P4D5 195 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 Q8N2B8 174 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 NPIPB3Q92617 1050 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 DPF1Q92782 380 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 ACY3Q96HD9 319 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 USMG5Q96IX5 58 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 GPR61Q9BZJ8 451 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 VSIRQ9H7M9 311 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 SLC25A22Q9H936 323 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 DNAJC4Q9NNZ3 241 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 TREM1Q9NP99 234 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 PRELID1Q9Y255 219 aa5.35□□□□□ -1.55
VPS13A-201ENST00000355766 TRAV41A0A0B4J266 112 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 A0A1W2PRE2 83 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
VPS13A-201ENST00000355766 F8W036 122 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 HMGB3O15347 200 aaKnown RBP5.34□□□□□ -1.55
VPS13A-201ENST00000355766 HYPMO75409 117 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 IGKV1-17P01599 117 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 REG1AP05451 166 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 C8orf88P0DMB2 117 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 ADCYAP1P18509 176 aa5.34□□□□□ -1.55
VPS13A-201ENST00000355766 PAX6P26367 422 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms