RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 TENM4Q6N022 2769 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 TRGV10A0A0A0MS01 117 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 IGLV2-14P01704 120 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 FABP2P12104 132 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 GCSHP23434 173 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 HIST1H1AQ02539 215 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-203ENST00000354674 CCL19Q99731 98 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 RAB9BQ9NP90 201 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 TRBV7-9A0A0J9YWB2 115 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 hADV38S2A0JD32 116 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 H3BMG7 143 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 IGHV4-39P01824 125 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 RHOBP62745 196 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 TMEM30BQ3MIR4 351 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 C2orf91Q6ZV80 131 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 MRAP2Q96G30 205 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 HEYLQ9NQ87 328 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-203ENST00000354674 JPT1Q9UK76 154 aa8.12□□□□□ -1.11
SYNE1-203ENST00000354674 SPINK8P0C7L1 97 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 NMUP48645 174 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 DLX6P56179 175 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 CX3CL1P78423 397 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 TMEM200BQ69YZ2 307 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 WFDC3Q8IUB2 231 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 C8orf46Q8TAG6 207 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 PSMG3-AS1Q96PY0 264 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 SCRT2Q9NQ03 307 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 A0A1W2PPM0 123 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 HELTA6NFD8 242 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 AMY1AP04745 511 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 OR52E5Q8NH55 327 aa8.11□□□□□ -1.11
SYNE1-203ENST00000354674 LIPFP07098 398 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 RFESDQ8TAC1 157 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 KCNIP2Q9NS61 270 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 PDLIM3Q53GG5 364 aaPredicted RBP8.1□□□□□ -1.11
SYNE1-203ENST00000354674 GLMPQ8WWB7 406 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 IDI2-AS1Q9NZ38 188 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 C1RLQ9NZP8 487 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 NCR2O95944 276 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 ATP5J2P56134 94 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 EIF4EBP1Q13541 118 aaPredicted RBP8.1□□□□□ -1.11
SYNE1-203ENST00000354674 IBA57Q5T440 356 aaKnown RBP8.1□□□□□ -1.11
SYNE1-203ENST00000354674 LY6G5BQ8NDX9 201 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 OR8A1Q8NGG7 326 aa8.1□□□□□ -1.11
SYNE1-203ENST00000354674 FBN2P35556 2912 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 TRBV20-1A0A075B6N2 111 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 IGHV1-24A0A0C4DH33 117 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 PSMB11A5LHX3 300 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 ZNF714Q96N38 554 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 ZNF257Q9Y2Q1 563 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 A6NDN8 102 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 TMEM249Q2WGJ8 235 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 ZBTB34Q8NCN2 500 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 DDB2Q92466 427 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 LSM10Q969L4 123 aaKnown RBP8.09□□□□□ -1.11
SYNE1-203ENST00000354674 URB1-AS1Q96HZ7 61 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 ANAPC13Q9BS18 74 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 TMEM147Q9BVK8 224 aa8.09□□□□□ -1.11
SYNE1-203ENST00000354674 RPUSD1Q9UJJ7 312 aaKnown RBP8.09□□□□□ -1.11
SYNE1-203ENST00000354674 C17orf98A8MV24 154 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 H0Y980 276 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 HLA-DQA1P01909 254 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 COL8A1P27658 744 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 ZNF645Q8N7E2 425 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 C5orf30Q96GV9 206 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 HSPB8Q9UJY1 196 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 IGHV3-43A0A0B4J1X8 118 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 VWC2LB2RUY7 222 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 IGHV3-43DP0DP04 118 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 ZNF134P52741 427 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 RTL8BQ17RB0 113 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 UTF1Q5T230 341 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 TCF24Q7RTU0 167 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 SYT8Q8NBV8 401 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 H1FXQ92522 213 aaKnown RBP8.08□□□□□ -1.12
SYNE1-203ENST00000354674 SAA2-SAA4A0A096LPE2 208 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 RBP4P02753 201 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 C5orf64Q2M2E5 130 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 TIGITQ495A1 244 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 PCP2Q8IVA1 136 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 DRAM1Q8N682 238 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 C8orf31Q8N9H6 132 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 CRYBG3Q68DQ2 2970 aa8.08□□□□□ -1.12
SYNE1-203ENST00000354674 CCL3L1P16619 93 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 GNG12Q9UBI6 72 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 TMSB15BA0A087X1C1 80 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 H3BRM9 83 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 IGHV3-7P01780 117 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 MT-ND6P03923 174 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 VDAC2P45880 294 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-203ENST00000354674 PSG5Q15238 335 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 CT45A1Q5HYN5 189 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 CT45A3Q8NHU0 189 aa8.07□□□□□ -1.12
SYNE1-203ENST00000354674 C10orf105Q8TEF2 133 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms