RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SLC25A48Q6ZT89 311 aaKnown RBP10.61□□□□□ -0.71
IFT88-202ENST00000351808 TEX29Q8N6K0 151 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 LEAP2Q969E1 77 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 FRYLO94915 3013 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 LTBRP36941 435 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 LINC00305Q7Z4B0 112 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 FMC1Q96HJ9 113 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 FAM173AQ9BQD7 235 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 LMO7DNF2Z398 122 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 ZNF714Q96N38 554 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 ASCL2Q99929 193 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 TNFRSF18Q9Y5U5 241 aa10.6□□□□□ -0.71
IFT88-202ENST00000351808 LINC01548A6NM66 108 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 FSTL3O95633 263 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 RBP4P02753 201 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 PRB4P10163 310 aaPredicted RBP10.59□□□□□ -0.71
IFT88-202ENST00000351808 SSR4P51571 173 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 TUSC5Q8IXB3 177 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 OR10X1Q8NGY0 326 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 CCDC179H3BU77 68 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 TCRAP04437 139 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 RNASE2P10153 161 aaKnown RBP10.59□□□□□ -0.71
IFT88-202ENST00000351808 MBNL2Q5VZF2 373 aaKnown RBP10.59□□□□□ -0.71
IFT88-202ENST00000351808 MAPKAPK5-AS1Q8N8E1 139 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 OR1L4Q8NGR5 311 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 CARD19Q96LW7 228 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 DLL1O00548 723 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 PRCDQ00LT1 54 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 PCOLCEQ15113 449 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 C2orf83Q53S99 150 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 PRNTQ86SH4 94 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 FAM90A1Q86YD7 464 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 PIFOQ8TCI5 191 aa10.59□□□□□ -0.71
IFT88-202ENST00000351808 TRBV20-1A0A075B6N2 111 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 MRPS21P82921 87 aaKnown RBP10.58□□□□□ -0.72
IFT88-202ENST00000351808 SFTA2Q6UW10 78 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 AMN1Q8IY45 258 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 KIR2DL4Q99706 377 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 ABCA1O95477 2261 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 INTS1Q8N201 2190 aaKnown RBP10.58□□□□□ -0.72
IFT88-202ENST00000351808 ORM2P19652 201 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 PAX8Q06710 450 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 SRSF1Q07955 248 aaKnown RBP eCLIP10.58□□□□□ -0.72
IFT88-202ENST00000351808 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 ZC2HC1BQ5TFG8 222 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 RPS19BP1Q86WX3 136 aaKnown RBP10.58□□□□□ -0.72
IFT88-202ENST00000351808 NPIPB3Q92617 1050 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 HARBI1Q96MB7 349 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 HIST1H4GQ99525 98 aa10.58□□□□□ -0.72
IFT88-202ENST00000351808 FREM2Q5SZK8 3169 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 NAV3Q8IVL0 2385 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 KIR2DS2P43631 304 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 CELSR3Q9NYQ7 3312 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 URB1O60287 2271 aaKnown RBP10.57□□□□□ -0.72
IFT88-202ENST00000351808 GAGE12JA6NER3 117 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 ZNF785A8K8V0 405 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 SMKR1H3BMG3 65 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 GAGE7O76087 117 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 GAGE12FP0CL80 117 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 GAGE12GP0CL81 117 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 GAGE12IP0CL82 117 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 GAGE4Q13068 117 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 KLF17Q5JT82 389 aaPredicted RBP10.57□□□□□ -0.72
IFT88-202ENST00000351808 ABHD17BQ5VST6 288 aa10.57□□□□□ -0.72
IFT88-202ENST00000351808 RBMXL3Q8N7X1 1067 aaKnown RBP10.57□□□□□ -0.72
IFT88-202ENST00000351808 DNAJC13O75165 2243 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 PRSS1P07477 247 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 PI4KAP42356 2102 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 Q86TA4 180 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 MOGAT3Q86VF5 341 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 RND1Q92730 232 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 Q9H3A6 140 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 TMEM213A2RRL7 107 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 IGKCP01834 107 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 ARL3P36405 182 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 ORMDL3Q8N138 153 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.56□□□□□ -0.72
IFT88-202ENST00000351808 OBP2BQ9NPH6 170 aa10.56□□□□□ -0.72
IFT88-202ENST00000351808 ID1P41134 155 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 MORN3Q6PF18 240 aaPredicted RBP10.55□□□□□ -0.72
IFT88-202ENST00000351808 C11orf53Q8IXP5 236 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 GATD1Q8NB37 220 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 PPDPFLQ8WWR9 84 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 RITA1Q96K30 269 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 PSMB2P49721 201 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 OR1L8Q8NGR8 309 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 ZMAT4Q9H898 229 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 UPK2O00526 184 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 PRTN3P24158 256 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 MEOX1P50221 254 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 GOLT1AQ6ZVE7 132 aa10.55□□□□□ -0.72
IFT88-202ENST00000351808 DLX4Q92988 240 aaPredicted RBP10.55□□□□□ -0.72
IFT88-202ENST00000351808 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 FABP5P3A8MUU1 101 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 NPYP01303 97 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 SAA2P0DJI9 122 aaPredicted RBP10.54□□□□□ -0.72
IFT88-202ENST00000351808 MPV17P39210 176 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 LOXL3P58215 753 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms