RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 COL8A1P27658 744 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 SSBP2P81877 361 aaPredicted RBP11.96□□□□□ -0.49
TRAF3-202ENST00000351691 RPL24P83731 157 aaKnown RBP11.96□□□□□ -0.49
TRAF3-202ENST00000351691 Q6AWC8 147 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 Q86TA4 180 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 DKK4Q9UBT3 224 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 FZR1Q9UM11 496 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 SAA1P0DJI8 122 aaPredicted RBP11.95□□□□□ -0.5
TRAF3-202ENST00000351691 SRSF6Q13247 344 aaKnown RBP11.95□□□□□ -0.5
TRAF3-202ENST00000351691 ZNF493Q6ZR52 646 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 NPIPB3Q92617 1050 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 RAB37Q96AX2 223 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 NAA38Q9BRA0 125 aaKnown RBP11.95□□□□□ -0.5
TRAF3-202ENST00000351691 SH3BGRL2Q9UJC5 107 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 U3KQK5 164 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 DYSFO75923 2080 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 GAGE12HA6NDE8 117 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 HOXB4P17483 251 aaPredicted RBP11.95□□□□□ -0.5
TRAF3-202ENST00000351691 MEF2CQ06413 473 aaPredicted RBP11.95□□□□□ -0.5
TRAF3-202ENST00000351691 OR10W1Q8NGF6 305 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 LEAP2Q969E1 77 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 VGLL1Q99990 258 aa11.95□□□□□ -0.5
TRAF3-202ENST00000351691 SHISA9B4DS77 424 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 F8W1H4 67 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 TCTEX1D4Q5JR98 221 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 UTF1Q5T230 341 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 GP9P14770 177 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 OR8A1Q8NGG7 326 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 SGK494Q96LW2 274 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 Q9H3A6 140 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 OTORQ9NRC9 128 aa11.94□□□□□ -0.5
TRAF3-202ENST00000351691 IGKV1-16P04430 117 aa11.93□□□□□ -0.5
TRAF3-202ENST00000351691 WT1P19544 449 aaPredicted RBP11.93□□□□□ -0.5
TRAF3-202ENST00000351691 GLRXP35754 106 aa11.93□□□□□ -0.5
TRAF3-202ENST00000351691 CLUHP3Q96NS8 147 aa11.93□□□□□ -0.5
TRAF3-202ENST00000351691 TRGV9Q99603 122 aa11.93□□□□□ -0.5
TRAF3-202ENST00000351691 LHBP01229 141 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 DEFB109BQ30KR1 87 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 ZNF414Q96IQ9 312 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 TIMM8BQ9Y5J9 83 aaPredicted RBP11.92□□□□□ -0.5
TRAF3-202ENST00000351691 LAMA5O15230 3695 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 ZNF207O43670 478 aaKnown RBP11.92□□□□□ -0.5
TRAF3-202ENST00000351691 CACNG7P62955 275 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 SMAGPQ0VAQ4 97 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 IGFL3Q6UXB1 125 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 ZNRF1Q8ND25 227 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 OR10X1Q8NGY0 326 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 TMEM167AQ8TBQ9 72 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 SPANXB1Q9NS25 103 aaPredicted RBP11.92□□□□□ -0.5
TRAF3-202ENST00000351691 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 FRYQ5TBA9 3013 aa11.92□□□□□ -0.5
TRAF3-202ENST00000351691 PRSS47A8MTI9 375 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 VSTM5A8MXK1 200 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 TM4SF5O14894 197 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 HBDP02042 147 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 IFI27P40305 119 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-202ENST00000351691 PAX8Q06710 450 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 SCGB2A2Q13296 93 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 SEM1Q6ZVN7 128 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 TSSC4Q9Y5U2 329 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-202ENST00000351691 DSCAML1Q8TD84 2053 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 GOSR1O95249 250 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 IGLV2-11P01706 119 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 THBDP07204 575 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 CRYGCP07315 174 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 GATA4P43694 442 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 PVRIGQ6DKI7 326 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 ZNF833PQ6ZTB9 187 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 PHLDA1Q8WV24 401 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-202ENST00000351691 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
TRAF3-202ENST00000351691 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
TRAF3-202ENST00000351691 KLK10O43240 276 aa11.9□□□□□ -0.5
TRAF3-202ENST00000351691 SRSF1Q07955 248 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRAF3-202ENST00000351691 MSMPQ1L6U9 139 aa11.9□□□□□ -0.5
TRAF3-202ENST00000351691 IFI27L1Q96BM0 104 aa11.9□□□□□ -0.5
TRAF3-202ENST00000351691 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.5
TRAF3-202ENST00000351691 TANC2Q9HCD6 1990 aa11.9□□□□□ -0.5
TRAF3-202ENST00000351691 M0R1B8 84 aa11.9□□□□□ -0.51
TRAF3-202ENST00000351691 HLA-DRB4P13762 266 aa11.9□□□□□ -0.51
TRAF3-202ENST00000351691 FCGR2BP31994 310 aaPredicted RBP11.9□□□□□ -0.51
TRAF3-202ENST00000351691 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.51
TRAF3-202ENST00000351691 CIARTQ8N365 385 aaPredicted RBP11.9□□□□□ -0.51
TRAF3-202ENST00000351691 MTURNQ8N3F0 131 aa11.9□□□□□ -0.51
TRAF3-202ENST00000351691 RPUSD1Q9UJJ7 312 aaKnown RBP11.9□□□□□ -0.51
TRAF3-202ENST00000351691 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.51
TRAF3-202ENST00000351691 URB1O60287 2271 aaKnown RBP11.89□□□□□ -0.51
TRAF3-202ENST00000351691 IGHV3OR15-7A0A075B7D8 119 aa11.89□□□□□ -0.51
TRAF3-202ENST00000351691 E9PLD3 99 aa11.89□□□□□ -0.51
TRAF3-202ENST00000351691 PLAUP00749 431 aa11.89□□□□□ -0.51
TRAF3-202ENST00000351691 ORM2P19652 201 aa11.89□□□□□ -0.51
TRAF3-202ENST00000351691 WT1-ASQ06250 92 aa11.89□□□□□ -0.51
TRAF3-202ENST00000351691 PCP2Q8IVA1 136 aa11.89□□□□□ -0.51
TRAF3-202ENST00000351691 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
TRAF3-202ENST00000351691 HARBI1Q96MB7 349 aa11.89□□□□□ -0.51
TRAF3-202ENST00000351691 CGB1A6NKQ9 187 aa11.88□□□□□ -0.51
TRAF3-202ENST00000351691 LINC01559Q495D7 138 aa11.88□□□□□ -0.51
TRAF3-202ENST00000351691 CCDC144NLQ6NUI1 221 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms