RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 TEX43Q6ZNM6 134 aa10.6□□□□□ -0.71
UBA3-201ENST00000349511 TMEM136Q6ZRR5 245 aa10.6□□□□□ -0.71
UBA3-201ENST00000349511 FAM167A-AS1Q96KT0 104 aa10.6□□□□□ -0.71
UBA3-201ENST00000349511 MRPL32Q9BYC8 188 aaKnown RBP10.6□□□□□ -0.71
UBA3-201ENST00000349511 SAMD10Q9BYL1 202 aa10.6□□□□□ -0.71
UBA3-201ENST00000349511 GNB4Q9HAV0 340 aa10.6□□□□□ -0.71
UBA3-201ENST00000349511 A0A1W2PN81 502 aa10.59□□□□□ -0.71
UBA3-201ENST00000349511 IGLC7A0M8Q6 106 aa10.59□□□□□ -0.71
UBA3-201ENST00000349511 PSMB11A5LHX3 300 aa10.59□□□□□ -0.71
UBA3-201ENST00000349511 SMAD7O15105 426 aaKnown RBP10.59□□□□□ -0.71
UBA3-201ENST00000349511 NDUFA3O95167 84 aa10.59□□□□□ -0.71
UBA3-201ENST00000349511 BRS3P32247 399 aa10.59□□□□□ -0.71
UBA3-201ENST00000349511 RPL19P84098 196 aaKnown RBP10.59□□□□□ -0.71
UBA3-201ENST00000349511 IBA57Q5T440 356 aaKnown RBP10.59□□□□□ -0.71
UBA3-201ENST00000349511 WDR73Q6P4I2 378 aa10.59□□□□□ -0.71
UBA3-201ENST00000349511 NPBQ8NG41 125 aa10.59□□□□□ -0.71
UBA3-201ENST00000349511 ACANP16112 2415 aa10.59□□□□□ -0.71
UBA3-201ENST00000349511 IGHV3-21A0A0B4J1V1 117 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 MT-ND6P03923 174 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 RAB4AP20338 218 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 KIAA1644Q3SXP7 199 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
UBA3-201ENST00000349511 Q8N6K4 173 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 CACNG8Q8WXS5 425 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 MBD6Q96DN6 1003 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 NEU1Q99519 415 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 SERTAD4Q9NUC0 356 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 CUBNO60494 3623 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 SMIM27A0A1W2PRY6 76 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 TEX22C9J3V5 150 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 UBE2L3P68036 154 aaKnown RBP10.58□□□□□ -0.72
UBA3-201ENST00000349511 EBI3Q14213 229 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 VN1R17PQ8TDU5 208 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 RNF2Q99496 336 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 DNAJC4Q9NNZ3 241 aa10.58□□□□□ -0.72
UBA3-201ENST00000349511 SONP18583 2426 aaKnown RBP10.57□□□□□ -0.72
UBA3-201ENST00000349511 AMY1AP04745 511 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 GPX1P07203 203 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 NDPQ00604 133 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 LY6EQ16553 131 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 COX19Q49B96 90 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 OR10J3Q5JRS4 329 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 MRPL54Q6P161 138 aaKnown RBP10.57□□□□□ -0.72
UBA3-201ENST00000349511 BCL6BQ8N143 479 aaPredicted RBP10.57□□□□□ -0.72
UBA3-201ENST00000349511 SIGLECL1Q8N7X8 197 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 NHLRC2Q8NBF2 726 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 LINC00479Q96M42 142 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 FBXL7Q9UJT9 491 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 RNF114Q9Y508 228 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 INS-IGF2F8WCM5 200 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 MFAP2P55001 183 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 Q8N9W7 124 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 PAM16Q9Y3D7 125 aa10.57□□□□□ -0.72
UBA3-201ENST00000349511 COX7A2P2O60397 106 aa10.56□□□□□ -0.72
UBA3-201ENST00000349511 CA1P00915 261 aaPredicted RBP10.56□□□□□ -0.72
UBA3-201ENST00000349511 PYYP10082 97 aa10.56□□□□□ -0.72
UBA3-201ENST00000349511 GATA3P23771 443 aa10.56□□□□□ -0.72
UBA3-201ENST00000349511 TMEM183BQ1AE95 376 aa10.56□□□□□ -0.72
UBA3-201ENST00000349511 ASPHD1Q5U4P2 390 aa10.56□□□□□ -0.72
UBA3-201ENST00000349511 PIFOQ8TCI5 191 aa10.56□□□□□ -0.72
UBA3-201ENST00000349511 FNDC4Q9H6D8 234 aaPredicted RBP10.56□□□□□ -0.72
UBA3-201ENST00000349511 IZUMO1RA6ND01 250 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 BMPR1BO00238 502 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 C10orf113Q5VZT2 155 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 PRSS57Q6UWY2 283 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 PATE2Q6UY27 113 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 NPIPB3Q92617 1050 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 RCHY1Q96PM5 261 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 MIEN1Q9BRT3 115 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 VAMP8Q9BV40 100 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 ZNF355PQ9NSJ1 428 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 CDC42EP3Q9UKI2 254 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 A0A1W2PS18 150 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 ZNF253O75346 499 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 HLA-DQA1P01909 254 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 SRIP30626 198 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 KRTDAPP60985 99 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 ZNF329Q86UD4 541 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 Q8N976 141 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 OR1L4Q8NGR5 311 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 RASL11BQ9BPW5 248 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 PAXXQ9BUH6 204 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 TNFRSF19Q9NS68 423 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 MYO9AB2RTY4 2548 aa10.55□□□□□ -0.72
UBA3-201ENST00000349511 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 TCRBV4S1A1TA0A5B7 111 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 LINC01548A6NM66 108 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 H3BUX3 64 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 SUB1P53999 127 aaKnown RBP eCLIP10.54□□□□□ -0.725e-6■■■■■ 28.3
UBA3-201ENST00000349511 ZNF562Q6V9R5 426 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 WNT10AQ9GZT5 417 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 MEGF9Q9H1U4 602 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 NRN1Q9NPD7 142 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 MRPL36Q9P0J6 103 aaKnown RBP10.54□□□□□ -0.72
UBA3-201ENST00000349511 IGHV7-81A0A0B4J1V7 117 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 APCSP02743 223 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 PMCHP20382 165 aa10.54□□□□□ -0.72
UBA3-201ENST00000349511 AMTP48728 403 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms