RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PRR31Q5SQ13 230 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 NYNRINQ9P2P1 1898 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 COLCA1Q6ZS62 124 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 TM2D1Q9BX74 207 aa9.14□□□□□ -0.95
SMARCE1-202ENST00000348513 CIARTQ8N365 385 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 MCRIP2Q9BUT9 160 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 IFI27L2Q9H2X8 130 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 RALGAPA2Q2PPJ7 1873 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 TM4SF5O14894 197 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 CSRP1P21291 193 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 TMEM30BQ3MIR4 351 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 SHISA2Q6UWI4 295 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 FOXI2Q6ZQN5 318 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 IGHV1-18A0A0C4DH31 117 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 PRSS57Q6UWY2 283 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 OR11H6Q8NGC7 330 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 WBP1Q96G27 269 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 M0R381 172 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 U3KQE9 123 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 SAA2-SAA4A0A096LPE2 208 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 NDUFB8O95169 186 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 SAA2P0DJI9 122 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 HTN3P15516 51 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 FOXG1P55316 489 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 FBLN5Q9UBX5 448 aa9.13□□□□□ -0.95
SMARCE1-202ENST00000348513 TRAV8-3A0A0A6YYJ7 113 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 TDRG1Q3Y452 100 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 AMTNQ6UX39 209 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 ACYP1P07311 99 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 OSR1Q8TAX0 266 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 ASCL2Q99929 193 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 WNT2P09544 360 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 TCF15Q12870 199 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 TEX45Q8NA69 505 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 GLMPQ8WWB7 406 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 NTN3O00634 580 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 PPP1R17O96001 155 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 SRSF1Q07955 248 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 C21orf62Q9NYP8 219 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 ALPK2Q86TB3 2170 aa9.12□□□□□ -0.95
SMARCE1-202ENST00000348513 C12orf74Q32Q52 190 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 MT-ATP8P03928 68 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 RNASE4P34096 147 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 WFDC2Q14508 124 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 GFI1Q99684 422 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 LINC00312Q9Y6C7 94 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 CENPVL3A0A0U1RRI6 287 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 SAA1P0DJI8 122 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 INAFM2P0DMQ5 153 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 RPL15P61313 204 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 ATP5G1P05496 136 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 THBDP07204 575 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 LINC00527Q9UJ94 153 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 TNFRSF18Q9Y5U5 241 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 PRR32B1ATL7 298 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 ZIC4Q8N9L1 334 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 OVOL2Q9BRP0 275 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 A0A0G2JMZ2 1700 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 LRRC37A2A6NM11 1700 aa9.11□□□□□ -0.95
SMARCE1-202ENST00000348513 SCN8AQ9UQD0 1980 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 MIR17HGQ75NE6 70 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 SPATA25Q9BR10 227 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 IGKV1D-13A0A0B4J2D9 117 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 IGLL5B9A064 214 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 IGKV1-13P0DP09 117 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 SEC61GP60059 68 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 NRN1LQ496H8 165 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 DNAJC30Q96LL9 226 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 KIR2DL4Q99706 377 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 SDK2Q58EX2 2172 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 J3QRE1 110 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 RFNGQ9Y644 331 aa9.1□□□□□ -0.95
SMARCE1-202ENST00000348513 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 DPH3P1Q9H4G8 78 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 DOCK4Q8N1I0 1966 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 TRPM7Q96QT4 1865 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 IGKV1-9A0A0C4DH69 117 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 NMSQ5H8A3 153 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 CSDC2Q9Y534 153 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 GNLYP22749 145 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 CHCHD5Q9BSY4 110 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 THADAQ6YHU6 1953 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 EFNA2O43921 213 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 LYPD3O95274 346 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 IGFBP3P17936 291 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 Q0VFX4 171 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 SCRT1Q9BWW7 348 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 NSUN5P1Q3KNT7 163 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-202ENST00000348513 TRAV40A0A0B4J280 105 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 YPEL1O60688 119 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 YPEL2Q96QA6 119 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 LINC01587Q99440 93 aa9.08□□□□□ -0.96
SMARCE1-202ENST00000348513 GVINP1Q7Z2Y8 2422 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms