RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 IGHV3OR16-8A0A075B7F1 116 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 TRAV8-1A0A0A6YYK1 113 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 A0A1B0GWJ7 208 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 OR11H12B2RN74 326 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 D6R8Y8 96 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 MMP23AO75900 390 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 IGLV1-44P01699 117 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 OR11H2Q8NH07 326 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 NPFFR1Q9GZQ6 430 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 ZNF492Q9P255 531 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 E7EQL1 145 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 RPL13AP40429 203 aaKnown RBP11.91□□□□□ -0.5
NUP50-201ENST00000347635 DMRTC2Q8IXT2 367 aaPredicted RBP11.91□□□□□ -0.5
NUP50-201ENST00000347635 OR1N2Q8NGR9 330 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
NUP50-201ENST00000347635 LYNX1G3V0Z9 82 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 LYNX1P0DP58 116 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 ZNF138P52744 262 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 DUX4L9Q6RFH8 374 aaPredicted RBP11.91□□□□□ -0.5
NUP50-201ENST00000347635 TTC9CQ8N5M4 171 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 Q8TCH9 128 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 IFI27L1Q96BM0 104 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 YAE1D1Q9NRH1 226 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 HSD52Q0P140 79 aa11.91□□□□□ -0.5
NUP50-201ENST00000347635 IGHV3OR16-10A0A075B7F0 116 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 A0A1W2PPI3 338 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 NUPR1O60356 82 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 A0A087X0K7 114 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 PPBPP02775 128 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 EBLN2Q6P2I7 272 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 M0R3E3 92 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 WT1P19544 449 aaPredicted RBP11.9□□□□□ -0.5
NUP50-201ENST00000347635 PSG3Q16557 428 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 CT83Q5H943 113 aa11.9□□□□□ -0.5
NUP50-201ENST00000347635 RPRMLQ8N4K4 120 aa11.9□□□□□ -0.51
NUP50-201ENST00000347635 SIGLEC9Q9Y336 463 aa11.9□□□□□ -0.51
NUP50-201ENST00000347635 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
NUP50-201ENST00000347635 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
NUP50-201ENST00000347635 CD24P25063 80 aa11.89□□□□□ -0.51
NUP50-201ENST00000347635 CFHR2P36980 270 aa11.89□□□□□ -0.51
NUP50-201ENST00000347635 DKK4Q9UBT3 224 aa11.89□□□□□ -0.51
NUP50-201ENST00000347635 OR9G4Q8NGQ1 327 aa11.89□□□□□ -0.51
NUP50-201ENST00000347635 TRGV3P03979 118 aa11.89□□□□□ -0.51
NUP50-201ENST00000347635 IGHV3-49A0A0A0MS15 119 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 GUSBP1Q15486 140 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 SP5Q6BEB4 398 aaPredicted RBP11.88□□□□□ -0.51
NUP50-201ENST00000347635 ASCL2Q99929 193 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 LYPD2Q6UXB3 125 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 OR5A1Q8NGJ0 315 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 IGKV2-40A0A087WW87 121 aaPredicted RBP11.88□□□□□ -0.51
NUP50-201ENST00000347635 IGKV2D-40P01614 121 aaPredicted RBP11.88□□□□□ -0.51
NUP50-201ENST00000347635 LYPD1Q8N2G4 141 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 FAM231BA6NCW3 169 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
NUP50-201ENST00000347635 SHANK1Q9Y566 2161 aa11.88□□□□□ -0.51
NUP50-201ENST00000347635 ZNF295-AS1Q8N0V1 137 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 KIR3DL3Q8N743 410 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 SCGB3A1Q96QR1 104 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 J3QKU1 62 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 DPM2O94777 84 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 GATA3P23771 443 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 NPIPB5A8MRT5 1133 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 BUB1B-PAK6H3BSN5 160 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 M0R381 172 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 CLEC19AQ6UXS0 136 aa11.87□□□□□ -0.51
NUP50-201ENST00000347635 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.86□□□□□ -0.51
NUP50-201ENST00000347635 NDUFA3O95167 84 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 IGKCP01834 107 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 ASPHD1Q5U4P2 390 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 SAMD13Q5VXD3 122 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 OR2K2Q8NGT1 345 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 SH2D1AO60880 128 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 SRRM4A7MD48 611 aaKnown RBP11.86□□□□□ -0.51
NUP50-201ENST00000347635 EVI2AP22794 236 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 ASIPP42127 132 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 A0A1W2PNU3 283 aaPredicted RBP11.86□□□□□ -0.51
NUP50-201ENST00000347635 C10orf142B7Z368 130 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 IGLL1P15814 213 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 WT1-ASQ06250 92 aa11.86□□□□□ -0.51
NUP50-201ENST00000347635 CD5LO43866 347 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 NCR2O95944 276 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 FXYD5Q96DB9 178 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 MYO7BQ6PIF6 2116 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 IGHV1-24A0A0C4DH33 117 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 WIPF2Q8TF74 440 aaPredicted RBP11.85□□□□□ -0.51
NUP50-201ENST00000347635 NHP2Q9NX24 153 aaKnown RBP11.85□□□□□ -0.51
NUP50-201ENST00000347635 IGLV3-9A0A075B6K5 115 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 ARMS2P0C7Q2 107 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 LGALS3P17931 250 aaKnown RBP11.85□□□□□ -0.51
NUP50-201ENST00000347635 SHANK2-AS3Q9BTD1 123 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 MEGF9Q9H1U4 602 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
NUP50-201ENST00000347635 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
NUP50-201ENST00000347635 HTN1P15515 57 aa11.84□□□□□ -0.51
NUP50-201ENST00000347635 FXYD7P58549 80 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms