RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 A0A0G2JNJ9 132 aa8.51□□□□□ -1.05
SMG7-201ENST00000347615 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
SMG7-201ENST00000347615 BRD3OSQ6XYD6 125 aa8.51□□□□□ -1.05
SMG7-201ENST00000347615 SYT8Q8NBV8 401 aa8.51□□□□□ -1.05
SMG7-201ENST00000347615 Q9UFV3 132 aa8.51□□□□□ -1.05
SMG7-201ENST00000347615 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 K7EN84 100 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 PET117Q6UWS5 81 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 FAM168AQ92567 244 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 CHD3Q12873 2000 aaKnown RBP8.5□□□□□ -1.05
SMG7-201ENST00000347615 ORAOV1Q8WV07 137 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 MBNL3Q9NUK0 354 aaKnown RBP8.5□□□□□ -1.05
SMG7-201ENST00000347615 TRBV6-6A0A0A6YYG2 114 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 TMEM178BH3BS89 294 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 COLCA1Q6ZS62 124 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 CCL19Q99731 98 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 A0A1W2PPI3 338 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 SH2D1AO60880 128 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 FAM106AQ4KMX7 169 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 UBE2L6O14933 153 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 C15orf32Q32M92 178 aa8.5□□□□□ -1.05
SMG7-201ENST00000347615 CENPVQ7Z7K6 275 aaPredicted RBP8.5□□□□□ -1.05
SMG7-201ENST00000347615 ITLN2Q8WWU7 325 aaPredicted RBP8.5□□□□□ -1.05
SMG7-201ENST00000347615 DENND4AQ7Z401 1863 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 C19orf67A6NJJ6 358 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 ATP5IP56385 69 aaPredicted RBP8.49□□□□□ -1.05
SMG7-201ENST00000347615 DDB2Q92466 427 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 SLC25A2Q9BXI2 301 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 FREM1Q5H8C1 2179 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 SLC25A48Q6ZT89 311 aaKnown RBP8.49□□□□□ -1.05
SMG7-201ENST00000347615 C18orf32Q8TCD1 76 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 ZNF672Q499Z4 452 aaPredicted RBP8.49□□□□□ -1.05
SMG7-201ENST00000347615 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 DYSFO75923 2080 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 Q6ZS49 121 aa8.49□□□□□ -1.05
SMG7-201ENST00000347615 SRRM4A7MD48 611 aaKnown RBP8.48□□□□□ -1.05
SMG7-201ENST00000347615 IGKCP01834 107 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 FRMD6-AS1P0C7T7 363 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 ZNF883P0CG24 379 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 SUMO2P61956 95 aaKnown RBP8.48□□□□□ -1.05
SMG7-201ENST00000347615 VMO1Q7Z5L0 202 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 PIMREGQ9BSJ6 248 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 ABCA4P78363 2273 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 TRAV2A0A0B4J234 112 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 BCL6BQ8N143 479 aaPredicted RBP8.48□□□□□ -1.05
SMG7-201ENST00000347615 C7orf69Q9H7B7 122 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
SMG7-201ENST00000347615 ALPK3Q96L96 1907 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 TMEM249Q2WGJ8 235 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 SAMD5Q5TGI4 173 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 BEND2Q8NDZ0 799 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 ZC2HC1AQ96GY0 325 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 C19orf54Q5BKX5 351 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 PCDH15Q96QU1 1955 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 SPRY2O43597 315 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 SAMD13Q5VXD3 122 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 SOX21Q9Y651 276 aaPredicted RBP8.48□□□□□ -1.05
SMG7-201ENST00000347615 V9GYV3 84 aa8.48□□□□□ -1.05
SMG7-201ENST00000347615 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 PPP1R17O96001 155 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 TMEM30BQ3MIR4 351 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 OR2K2Q8NGT1 345 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 CHCHD1Q96BP2 118 aaKnown RBP8.47□□□□□ -1.05
SMG7-201ENST00000347615 TRAV40A0A0B4J280 105 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 C17orf58Q2M2W7 97 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 VWC2Q2TAL6 325 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 C5orf30Q96GV9 206 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 A0A0G2JLM5 398 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 DPM2O94777 84 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 SIGLEC9Q9Y336 463 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 ZNF815PA8K554 130 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.47□□□□□ -1.05
SMG7-201ENST00000347615 ATP5LO75964 103 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 IGLV3-1P01715 115 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 KLRB1Q12918 225 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 GTSF1LQ9H1H1 148 aa8.47□□□□□ -1.05
SMG7-201ENST00000347615 LINC00477Q96M19 166 aa8.46□□□□□ -1.05
SMG7-201ENST00000347615 C17orf77Q96MU5 243 aa8.46□□□□□ -1.05
SMG7-201ENST00000347615 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.05
SMG7-201ENST00000347615 ETV2O00321 342 aaPredicted RBP8.46□□□□□ -1.05
SMG7-201ENST00000347615 RRN3P1Q2M238 152 aa8.46□□□□□ -1.05
SMG7-201ENST00000347615 OR13C6PQ8NH95 151 aa8.46□□□□□ -1.05
SMG7-201ENST00000347615 DUX3Q96PT4 197 aa8.46□□□□□ -1.05
SMG7-201ENST00000347615 GTF3C1Q12789 2109 aa8.46□□□□□ -1.05
SMG7-201ENST00000347615 MED13Q9UHV7 2174 aa8.46□□□□□ -1.06
SMG7-201ENST00000347615 WISP2O76076 250 aa8.46□□□□□ -1.06
SMG7-201ENST00000347615 SNRPD3P62318 126 aaKnown RBP8.46□□□□□ -1.06
SMG7-201ENST00000347615 CYSLTR1Q9Y271 337 aa8.46□□□□□ -1.06
SMG7-201ENST00000347615 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.46□□□□□ -1.066e-7■■■■■ 31.2
SMG7-201ENST00000347615 BUB1B-PAK6H3BSN5 160 aa8.46□□□□□ -1.06
SMG7-201ENST00000347615 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
SMG7-201ENST00000347615 TMEM158Q8WZ71 300 aa8.46□□□□□ -1.06
SMG7-201ENST00000347615 NPFFO15130 113 aa8.46□□□□□ -1.06
SMG7-201ENST00000347615 COX6CP09669 75 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms