RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CFHR4Q92496 578 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 NOL4LQ96MY1 436 aaPredicted RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 A0A1B0GXF2 115 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 C19orf71A6NCJ1 209 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 M0R3E3 92 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 CCL21O00585 134 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 NUTF2P61970 127 aaKnown RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 USF2Q15853 346 aaPredicted RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 C8orf31Q8N9H6 132 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 SRSF12Q8WXF0 261 aaKnown RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 CLEC7AQ9BXN2 247 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 PRSS22Q9GZN4 317 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 Q9H3A6 140 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 CLEC5AQ9NY25 188 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 RAXQ9Y2V3 346 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 APOHP02749 345 aaPredicted RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 AMY1AP04745 511 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 SLC25A5P05141 298 aaKnown RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 FAM106CPP0CH98 169 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 RPL27AP46776 148 aaKnown RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 TMEM183BQ1AE95 376 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 FAM106AQ4KMX7 169 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 FAM71F2Q6NXP2 309 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 BEND2Q8NDZ0 799 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 TNFRSF14Q92956 283 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 ALKBH7Q9BT30 221 aaPredicted RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 MRPL32Q9BYC8 188 aaKnown RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 KLF12Q9Y4X4 402 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 F11RQ9Y624 299 aaKnown RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 ARL2-SNX15V9GYD0 113 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 IGHV3-35A0A0C4DH35 117 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 MUC21A0A0G2JKD1 596 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 MUC21A0A140T8X8 626 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 LINC01548A6NM66 108 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 MRPS12O15235 138 aaKnown RBP4.75□□□□□ -1.65
CLCN3-201ENST00000347613 TAS2R45P59539 299 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 LYZP61626 148 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 MUC21Q5SSG8 566 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 OR4A5Q8NH83 315 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 AJUBAQ96IF1 538 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 PGLYRP4Q96LB8 373 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 SLC25A39Q9BZJ4 359 aaPredicted RBP4.75□□□□□ -1.65
CLCN3-201ENST00000347613 ONECUT1Q9UBC0 465 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 LTAP01374 205 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 APCSP02743 223 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 TCRAP04437 139 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 NTF3P20783 257 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 HLA-DMBP28068 263 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 AMTP48728 403 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 ZNF705AQ6ZN79 300 aaPredicted RBP4.75□□□□□ -1.65
CLCN3-201ENST00000347613 TEX45Q8NA69 505 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 OR2D3Q8NGH3 330 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 PERPQ96FX8 193 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 ZC2HC1AQ96GY0 325 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 KCNS1Q96KK3 526 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 C8orf49Q96NF6 230 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 PSMG3-AS1Q96PY0 264 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 CHODLQ9H9P2 273 aa4.75□□□□□ -1.65
CLCN3-201ENST00000347613 MRPL27Q9P0M9 148 aaKnown RBP4.75□□□□□ -1.65
CLCN3-201ENST00000347613 C2orf70A6NJV1 201 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 ZNF324O75467 553 aaPredicted RBP4.74□□□□□ -1.65
CLCN3-201ENST00000347613 RBP4P02753 201 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 EGR2P11161 476 aaPredicted RBP4.74□□□□□ -1.65
CLCN3-201ENST00000347613 TPPP2P59282 170 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 MMDQ15546 238 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 VMA21Q3ZAQ7 101 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 Q6ZQT7 251 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 LY6G5BQ8NDX9 201 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 FANCD2OSQ96PS1 177 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 TRGV9Q99603 122 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 C19orf24Q9BVV8 132 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 SAMD10Q9BYL1 202 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 RAB9BQ9NP90 201 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 USP9XQ93008 2570 aaPredicted RBP4.74□□□□□ -1.65
CLCN3-201ENST00000347613 SAP30O75446 220 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 IGHG4P01861 327 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 CD3EP07766 207 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 SSX8Q7RTT4 187 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 C8orf46Q8TAG6 207 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 TRAV9-1A0A075B6T8 112 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 DIRC3C9JPN6 131 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 MC5RP33032 325 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 LGALS7P47929 136 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 GOLT1AQ6ZVE7 132 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 ZNF491Q8N8L2 437 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 VSTM2AQ8TAG5 236 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 GRAMD2BQ96HH9 432 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 VKORC1Q9BQB6 163 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 SOX21Q9Y651 276 aaPredicted RBP4.74□□□□□ -1.65
CLCN3-201ENST00000347613 NF1P21359 2839 aa4.74□□□□□ -1.65
CLCN3-201ENST00000347613 HYPMO75409 117 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 NDUFB8O95169 186 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 GAS8-AS1O95177 125 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 NPSP0C0P6 89 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 HOXB4P17483 251 aaPredicted RBP4.73□□□□□ -1.65
CLCN3-201ENST00000347613 BRS3P32247 399 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 FXYD7P58549 80 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 PAFAH1B2P68402 229 aa4.73□□□□□ -1.65
CLCN3-201ENST00000347613 TMEM30BQ3MIR4 351 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms