RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TRBV12-3P01733 135 aa16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 RPL7P18124 248 aaKnown RBP16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 TMEM190Q8WZ59 177 aa16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 SMCO4Q9NRQ5 59 aa16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 IGHV3OR16-8A0A075B7F1 116 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 A0A087WWC5 75 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 NDUFA4O00483 81 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 LY6G6DO95868 133 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 RPL23P62829 140 aaKnown RBP16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 ADIRFQ15847 76 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 C10orf99Q6UWK7 81 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 CBLN2Q8IUK8 224 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 METTL26Q96S19 204 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 SMR3AQ99954 134 aa16.55■□□□□ 0.24
TSPAN3-202ENST00000346495 TRBV19A0A075B6N1 114 aa16.54■□□□□ 0.24
TSPAN3-202ENST00000346495 CLPSL1A2RUU4 121 aa16.54■□□□□ 0.24
TSPAN3-202ENST00000346495 PGPA6NDG6 321 aa16.54■□□□□ 0.24
TSPAN3-202ENST00000346495 SRD5A1P18405 259 aa16.54■□□□□ 0.24
TSPAN3-202ENST00000346495 Q9H3A6 140 aa16.54■□□□□ 0.24
TSPAN3-202ENST00000346495 ESM1Q9NQ30 184 aa16.54■□□□□ 0.24
TSPAN3-202ENST00000346495 SERTAD4Q9NUC0 356 aa16.54■□□□□ 0.24
TSPAN3-202ENST00000346495 CDC42EP3Q9UKI2 254 aa16.54■□□□□ 0.24
TSPAN3-202ENST00000346495 FAM181BA6NEQ2 426 aa16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 HELTA6NFD8 242 aa16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 H3BTX0 84 aa16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 GGCTO75223 188 aaKnown RBP16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 RPL35P42766 123 aaKnown RBP16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 OR8I2Q8N0Y5 310 aa16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 C2CD4CQ8TF44 421 aa16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 HIST1H2BAQ96A08 127 aa16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 OTORQ9NRC9 128 aa16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 PEF1Q9UBV8 284 aaKnown RBP16.53■□□□□ 0.24
TSPAN3-202ENST00000346495 C9JCJ5 164 aa16.52■□□□□ 0.24
TSPAN3-202ENST00000346495 SLC25A5P05141 298 aaKnown RBP16.52■□□□□ 0.24
TSPAN3-202ENST00000346495 LYPD1Q8N2G4 141 aa16.52■□□□□ 0.24
TSPAN3-202ENST00000346495 GPR82Q96P67 336 aa16.52■□□□□ 0.24
TSPAN3-202ENST00000346495 PEX7O00628 323 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 BUB3O43684 328 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 RPLP1P05386 114 aaKnown RBP16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 RPL15P61313 204 aaKnown RBP16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 PDE6HQ13956 83 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 C1orf194Q5T5A4 169 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 RNF152Q8N8N0 203 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 C5orf17Q8NAS9 161 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 MYOZ3Q8TDC0 251 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 ZNF418Q8TF45 676 aaPredicted RBP16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 TUBA4BQ9H853 241 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 EPDR1Q9UM22 224 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 PRELID1Q9Y255 219 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 MXRA5Q9NR99 2828 aa16.52■□□□□ 0.23
TSPAN3-202ENST00000346495 Q6ZSV7 163 aa16.51■□□□□ 0.23
TSPAN3-202ENST00000346495 LINC01551Q86U37 167 aa16.51■□□□□ 0.23
TSPAN3-202ENST00000346495 LY96Q9Y6Y9 160 aa16.51■□□□□ 0.23
TSPAN3-202ENST00000346495 U3KQE9 123 aa16.51■□□□□ 0.23
TSPAN3-202ENST00000346495 TRBV20OR9-2A0A075B6H5 130 aa16.5■□□□□ 0.23
TSPAN3-202ENST00000346495 CNN1P51911 297 aaKnown RBP16.5■□□□□ 0.23
TSPAN3-202ENST00000346495 C17orf77Q96MU5 243 aa16.5■□□□□ 0.23
TSPAN3-202ENST00000346495 TSPAN4O14817 238 aa16.49■□□□□ 0.23
TSPAN3-202ENST00000346495 RNASE1P07998 156 aaKnown RBP16.49■□□□□ 0.23
TSPAN3-202ENST00000346495 FOSL1P15407 271 aa16.49■□□□□ 0.23
TSPAN3-202ENST00000346495 ATF4P18848 351 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-202ENST00000346495 TAS2R60P59551 318 aa16.49■□□□□ 0.23
TSPAN3-202ENST00000346495 UBE2E2Q96LR5 201 aa16.49■□□□□ 0.23
TSPAN3-202ENST00000346495 CTDSP1Q9GZU7 261 aa16.49■□□□□ 0.23
TSPAN3-202ENST00000346495 ZNF207O43670 478 aaKnown RBP16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 MT-ND4LP03901 98 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 CRYBA1P05813 215 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 GNG4P50150 75 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 SIGLEC15Q6ZMC9 328 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 OR5B12Q96R08 314 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 ATG101Q9BSB4 218 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 TMEM242Q9NWH2 141 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 TLN2Q9Y4G6 2542 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 MYO9AB2RTY4 2548 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 GNG5P63218 68 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 PSG9Q00887 426 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 RNF212Q495C1 297 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 CENPWQ5EE01 88 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 UNQ9165/PRO28630Q6UXU0 137 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 KLHDC1Q8N7A1 406 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 CMTM2Q8TAZ6 248 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 SMAD5-AS1Q9Y6J3 95 aa16.48■□□□□ 0.23
TSPAN3-202ENST00000346495 LGALS1P09382 135 aaKnown RBP16.47■□□□□ 0.23
TSPAN3-202ENST00000346495 CD99P14209 185 aa16.47■□□□□ 0.23
TSPAN3-202ENST00000346495 GALR1P47211 349 aa16.47■□□□□ 0.23
TSPAN3-202ENST00000346495 EXOC3-AS1Q8N2X6 119 aa16.47■□□□□ 0.23
TSPAN3-202ENST00000346495 OCC1Q8TAD7 63 aa16.47■□□□□ 0.23
TSPAN3-202ENST00000346495 ISOC2Q96AB3 205 aa16.47■□□□□ 0.23
TSPAN3-202ENST00000346495 A0A087X0K7 114 aa16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 CXorf65A6NEN9 183 aa16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 PGPEP1LA6NFU8 196 aa16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 SLC17A3O00476 420 aa16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 ZNF253O75346 499 aa16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 APOHP02749 345 aaPredicted RBP16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 S100A9P06702 114 aaKnown RBP16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 HILS1P60008 231 aa16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 FAM106AQ4KMX7 169 aa16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 C15orf54Q8N8G6 183 aa16.46■□□□□ 0.23
TSPAN3-202ENST00000346495 ANAPC16Q96DE5 110 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms