RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 CHD8Q9HCK8 2581 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 PRSS57Q6UWY2 283 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 LTAP01374 205 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 WT1-ASQ06250 92 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 RUSC1-AS1Q66K80 236 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 Q6ZS92 163 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 TPPP3Q9BW30 176 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 NDUFA4L2Q9NRX3 87 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 SPCS1Q9Y6A9 102 aa17.14■□□□□ 0.33
TRIM3-201ENST00000345851 MSMPQ1L6U9 139 aa17.13■□□□□ 0.33
TRIM3-201ENST00000345851 CT83Q5H943 113 aa17.13■□□□□ 0.33
TRIM3-201ENST00000345851 LOC389332A0A1B0GUA5 103 aa17.13■□□□□ 0.33
TRIM3-201ENST00000345851 hADV38S2A0JD32 116 aa17.13■□□□□ 0.33
TRIM3-201ENST00000345851 ARMS2P0C7Q2 107 aa17.13■□□□□ 0.33
TRIM3-201ENST00000345851 LOXL1Q08397 574 aaPredicted RBP17.13■□□□□ 0.33
TRIM3-201ENST00000345851 IGHV3-21A0A0B4J1V1 117 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 TCRAP04437 139 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 CSN1S1P47710 185 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 PLP1P60201 277 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 RPL24P83731 157 aaKnown RBP17.12■□□□□ 0.33
TRIM3-201ENST00000345851 NEGR1Q7Z3B1 354 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 JKAMPQ9P055 326 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 FAM215AQ9Y5M1 114 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 ATP5IP56385 69 aaPredicted RBP17.12■□□□□ 0.33
TRIM3-201ENST00000345851 PERPQ96FX8 193 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 FMC1Q96HJ9 113 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 Q9H3A6 140 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 PROCRQ9UNN8 238 aa17.12■□□□□ 0.33
TRIM3-201ENST00000345851 SPRY3O43610 288 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 PRNTQ86SH4 94 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 MRPL20Q9BYC9 149 aaKnown RBP17.11■□□□□ 0.33
TRIM3-201ENST00000345851 NCOR2Q9Y618 2525 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 MEF2CQ06413 473 aaPredicted RBP17.11■□□□□ 0.33
TRIM3-201ENST00000345851 IGFL3Q6UXB1 125 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 ZNF492Q9P255 531 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 F11RQ9Y624 299 aaKnown RBP17.11■□□□□ 0.33
TRIM3-201ENST00000345851 PRSS47A8MTI9 375 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 LGALS7P47929 136 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 RBPJQ06330 500 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 SAMD13Q5VXD3 122 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 GFRA4Q9GZZ7 299 aa17.11■□□□□ 0.33
TRIM3-201ENST00000345851 A1L4Q6 167 aa17.1■□□□□ 0.33
TRIM3-201ENST00000345851 IFI27P40305 119 aaPredicted RBP17.1■□□□□ 0.33
TRIM3-201ENST00000345851 VSTM2AQ8TAG5 236 aa17.1■□□□□ 0.33
TRIM3-201ENST00000345851 NPFFR1Q9GZQ6 430 aa17.1■□□□□ 0.33
TRIM3-201ENST00000345851 HAX1O00165 279 aa17.1■□□□□ 0.33
TRIM3-201ENST00000345851 APELAP0DMC3 54 aa17.1■□□□□ 0.33
TRIM3-201ENST00000345851 SRSF12Q8WXF0 261 aaKnown RBP17.1■□□□□ 0.33
TRIM3-201ENST00000345851 PLSCR4Q9NRQ2 329 aa17.1■□□□□ 0.33
TRIM3-201ENST00000345851 SSUH2Q9Y2M2 353 aa17.1■□□□□ 0.33
TRIM3-201ENST00000345851 CACNG7P62955 275 aa17.09■□□□□ 0.33
TRIM3-201ENST00000345851 TPRP12270 2363 aaKnown RBP17.09■□□□□ 0.33
TRIM3-201ENST00000345851 POLEQ07864 2286 aa17.09■□□□□ 0.33
TRIM3-201ENST00000345851 A0A1B0GUT8 65 aa17.09■□□□□ 0.33
TRIM3-201ENST00000345851 C22orf46C9J442 243 aa17.09■□□□□ 0.33
TRIM3-201ENST00000345851 NMUP48645 174 aa17.09■□□□□ 0.33
TRIM3-201ENST00000345851 S100A7AQ86SG5 101 aa17.09■□□□□ 0.33
TRIM3-201ENST00000345851 A0A1W2PPM0 123 aa17.08■□□□□ 0.33
TRIM3-201ENST00000345851 CFHR2P36980 270 aa17.08■□□□□ 0.33
TRIM3-201ENST00000345851 ZNF474Q6S9Z5 364 aaPredicted RBP17.08■□□□□ 0.33
TRIM3-201ENST00000345851 PKDREJQ9NTG1 2253 aa17.08■□□□□ 0.32
TRIM3-201ENST00000345851 FBLL1A6NHQ2 334 aaKnown RBP17.08■□□□□ 0.32
TRIM3-201ENST00000345851 HCP5Q6MZN7 132 aa17.08■□□□□ 0.32
TRIM3-201ENST00000345851 GOLT1AQ6ZVE7 132 aa17.08■□□□□ 0.32
TRIM3-201ENST00000345851 PCP2Q8IVA1 136 aa17.08■□□□□ 0.32
TRIM3-201ENST00000345851 FAM216BQ8N7L0 139 aa17.08■□□□□ 0.32
TRIM3-201ENST00000345851 CCL13Q99616 98 aa17.08■□□□□ 0.32
TRIM3-201ENST00000345851 GTSF1LQ9H1H1 148 aa17.08■□□□□ 0.32
TRIM3-201ENST00000345851 IGHV1-18A0A0C4DH31 117 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 SMAD7O15105 426 aaKnown RBP17.07■□□□□ 0.32
TRIM3-201ENST00000345851 MZT1Q08AG7 82 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 HSD52Q0P140 79 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 C22orf34Q6ZV56 151 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 Q86TA4 180 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 BOD1L2Q8IYS8 172 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 STXBP6Q8NFX7 210 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 CGB1A6NKQ9 187 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 PRR30Q53SZ7 412 aaPredicted RBP17.07■□□□□ 0.32
TRIM3-201ENST00000345851 MBNL2Q5VZF2 373 aaKnown RBP17.07■□□□□ 0.32
TRIM3-201ENST00000345851 SLC25A48Q6ZT89 311 aaKnown RBP17.07■□□□□ 0.32
TRIM3-201ENST00000345851 EXOC3-AS1Q8N2X6 119 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 OR5AN1Q8NGI8 311 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 A0A096LNJ9 63 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 RAB9BQ9NP90 201 aa17.07■□□□□ 0.32
TRIM3-201ENST00000345851 TEX48A0A1B0GUV7 120 aa17.06■□□□□ 0.32
TRIM3-201ENST00000345851 COL6A6A6NMZ7 2263 aa17.06■□□□□ 0.32
TRIM3-201ENST00000345851 MBD3L4A6NDZ8 208 aaPredicted RBP17.05■□□□□ 0.32
TRIM3-201ENST00000345851 MBD3L3A6NE82 208 aaPredicted RBP17.05■□□□□ 0.32
TRIM3-201ENST00000345851 MBD3L5A6NJ08 208 aaPredicted RBP17.05■□□□□ 0.32
TRIM3-201ENST00000345851 NPIPB6E9PJ23 425 aa17.05■□□□□ 0.32
TRIM3-201ENST00000345851 WFDC3Q8IUB2 231 aa17.05■□□□□ 0.32
TRIM3-201ENST00000345851 MBD3L2Q8NHZ7 208 aaPredicted RBP17.05■□□□□ 0.32
TRIM3-201ENST00000345851 INSIG2Q9Y5U4 225 aa17.05■□□□□ 0.32
TRIM3-201ENST00000345851 SERTM2A0A1B0GWG4 89 aa17.05■□□□□ 0.32
TRIM3-201ENST00000345851 PPIAL4GP0DN37 164 aa17.05■□□□□ 0.32
TRIM3-201ENST00000345851 GP9P14770 177 aa17.05■□□□□ 0.32
TRIM3-201ENST00000345851 SMAGPQ0VAQ4 97 aa17.05■□□□□ 0.32
TRIM3-201ENST00000345851 ADAMTSL5Q6ZMM2 481 aa17.05■□□□□ 0.32
TRIM3-201ENST00000345851 THAP8Q8NA92 274 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms