RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 NGBQ9NPG2 151 aa18.3■□□□□ 0.52
NKX2-3-201ENST00000344586 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.3■□□□□ 0.52
NKX2-3-201ENST00000344586 TRBV19A0A075B6N1 114 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 TMEM75Q8N9X5 138 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 ZNF738Q8NE65 137 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 C17orf77Q96MU5 243 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 SHANK2-AS3Q9BTD1 123 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 ROS1P08922 2347 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 KALRNO60229 2985 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 OR5AL1P0C617 328 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 PTTG1IPP53801 180 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 GFRALQ6UXV0 394 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 RPEQ96AT9 228 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 ASCL2Q99929 193 aa18.29■□□□□ 0.52
NKX2-3-201ENST00000344586 H3BRN7 92 aa18.28■□□□□ 0.52
NKX2-3-201ENST00000344586 Q8NA96 180 aa18.28■□□□□ 0.52
NKX2-3-201ENST00000344586 SCNM1Q9BWG6 230 aa18.28■□□□□ 0.52
NKX2-3-201ENST00000344586 LYNX1G3V0Z9 82 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 K7EIM0 57 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 ARMS2P0C7Q2 107 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 LYNX1P0DP58 116 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 HTR1DP28221 377 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 SIGLEC15Q6ZMC9 328 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 ABHD17AQ96GS6 310 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 TMUB1Q9BVT8 246 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 TMEM191AQ9H0A3 160 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 ADGRG4Q8IZF6 3080 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 DCHS1Q96JQ0 3298 aa18.27■□□□□ 0.52
NKX2-3-201ENST00000344586 A0A1B0GUT8 65 aa18.27■□□□□ 0.51
NKX2-3-201ENST00000344586 DMXL2Q8TDJ6 3036 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 MALRD1Q5VYJ5 2156 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 LY6LH3BQJ8 138 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 UBE2V1Q13404 147 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 PLGLAQ15195 96 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 PET117Q6UWS5 81 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 GATD1Q8NB37 220 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 MAP1LC3CQ9BXW4 147 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 CNOT1A5YKK6 2376 aaKnown RBP18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 PRB4P10163 310 aaPredicted RBP18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 APOBEC3AP31941 199 aaPredicted RBP18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 BPIFA4PQ86YQ2 179 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 TMEM190Q8WZ59 177 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 SRSF8Q9BRL6 282 aaKnown RBP18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 CBY1Q9Y3M2 126 aa18.26■□□□□ 0.51
NKX2-3-201ENST00000344586 HLA-DRB1P01911 266 aa18.25■□□□□ 0.51
NKX2-3-201ENST00000344586 PSG8Q9UQ74 426 aa18.25■□□□□ 0.51
NKX2-3-201ENST00000344586 PKDREJQ9NTG1 2253 aa18.25■□□□□ 0.51
NKX2-3-201ENST00000344586 PPIAL4CA0A0B4J2A2 164 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 CSN3P07498 182 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 PPIAL4GP0DN37 164 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 MPV17L2Q567V2 206 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 RNF5Q99942 180 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 MCRIP2Q9BUT9 160 aaKnown RBP18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 B9A039 149 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 PSG3Q16557 428 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 LDLRAD2Q5SZI1 272 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 NEU4Q8WWR8 484 aaPredicted RBP18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 SCRT2Q9NQ03 307 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 HSPB8Q9UJY1 196 aa18.24■□□□□ 0.51
NKX2-3-201ENST00000344586 AKAP13Q12802 2813 aa18.23■□□□□ 0.51
NKX2-3-201ENST00000344586 MRPS12O15235 138 aaKnown RBP18.23■□□□□ 0.51
NKX2-3-201ENST00000344586 CRIP1P50238 77 aa18.23■□□□□ 0.51
NKX2-3-201ENST00000344586 RIGQ13278 110 aa18.23■□□□□ 0.51
NKX2-3-201ENST00000344586 SLC25A34Q6PIV7 304 aa18.23■□□□□ 0.51
NKX2-3-201ENST00000344586 ZNF491Q8N8L2 437 aa18.23■□□□□ 0.51
NKX2-3-201ENST00000344586 ZZEF1O43149 2961 aa18.23■□□□□ 0.51
NKX2-3-201ENST00000344586 TIMM23O14925 209 aa18.22■□□□□ 0.51
NKX2-3-201ENST00000344586 CNIH1O95406 144 aa18.22■□□□□ 0.51
NKX2-3-201ENST00000344586 LYPD1Q8N2G4 141 aa18.22■□□□□ 0.51
NKX2-3-201ENST00000344586 RNF125Q96EQ8 232 aa18.22■□□□□ 0.51
NKX2-3-201ENST00000344586 RNF24Q9Y225 148 aa18.22■□□□□ 0.51
NKX2-3-201ENST00000344586 HSBP1L1C9JCN9 74 aa18.22■□□□□ 0.51
NKX2-3-201ENST00000344586 PRR30Q53SZ7 412 aaPredicted RBP18.21■□□□□ 0.51
NKX2-3-201ENST00000344586 LINC01545Q5VT33 79 aa18.21■□□□□ 0.51
NKX2-3-201ENST00000344586 ZNF414Q96IQ9 312 aa18.21■□□□□ 0.51
NKX2-3-201ENST00000344586 ATMQ13315 3056 aa18.21■□□□□ 0.51
NKX2-3-201ENST00000344586 H0Y8G0 127 aa18.21■□□□□ 0.51
NKX2-3-201ENST00000344586 K7EQM0 130 aa18.21■□□□□ 0.51
NKX2-3-201ENST00000344586 CEP250Q9BV73 2442 aa18.2■□□□□ 0.5
NKX2-3-201ENST00000344586 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.2■□□□□ 0.5
NKX2-3-201ENST00000344586 IL4P05112 153 aa18.2■□□□□ 0.5
NKX2-3-201ENST00000344586 FBLN7Q53RD9 439 aa18.2■□□□□ 0.5
NKX2-3-201ENST00000344586 AP5S1Q9NUS5 200 aa18.2■□□□□ 0.5
NKX2-3-201ENST00000344586 ZGRF1Q86YA3 2104 aa18.2■□□□□ 0.5
NKX2-3-201ENST00000344586 IGHV2-70DA0A0C4DH43 119 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 A0A1B0GW15 77 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 WI2-2373I1.2A0A1W2PRP0 233 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 M0R3E3 92 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 CD3EP07766 207 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 BVES-AS1Q5T3Y7 98 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 PMCHL2Q9BQD1 86 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 LOC105371242A0A075B767 164 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 C8orf49Q96NF6 230 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 ONECUT1Q9UBC0 465 aa18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 TIMM8BQ9Y5J9 83 aaPredicted RBP18.19■□□□□ 0.5
NKX2-3-201ENST00000344586 NUDT3O95989 172 aa18.18■□□□□ 0.5
NKX2-3-201ENST00000344586 Q6AWC8 147 aa18.18■□□□□ 0.5
NKX2-3-201ENST00000344586 BCL6BQ8N143 479 aaPredicted RBP18.18■□□□□ 0.5
NKX2-3-201ENST00000344586 MS4A6AQ9H2W1 248 aa18.18■□□□□ 0.5
NKX2-3-201ENST00000344586 FCGR2BP31994 310 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms