RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 UBTD1Q9HAC8 227 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 CENPEQ02224 2701 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 LTAP01374 205 aa11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 P01737 135 aa11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 GPX1P07203 203 aa11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 NTF3P20783 257 aa11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 OR10J3Q5JRS4 329 aa11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 OR2D3Q8NGH3 330 aa11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 RPP21Q9H633 154 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 MRPL27Q9P0M9 148 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 PAM16Q9Y3D7 125 aa11.75□□□□□ -0.53
VIPAS39-202ENST00000343765 GNG7O60262 68 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 NDUFA3O95167 84 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 FCGR2BP31994 310 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 NPBQ8NG41 125 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 DAZAP1Q96EP5 407 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 PGLYRP4Q96LB8 373 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 CHRDL1Q9BU40 450 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 OTORQ9NRC9 128 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 C1orf194Q5T5A4 169 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 Q86TA4 180 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 ARPC1AQ92747 370 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 SRSF8Q9BRL6 282 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 NRN1Q9NPD7 142 aa11.74□□□□□ -0.53
VIPAS39-202ENST00000343765 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 C18orf32Q8TCD1 76 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 SHANK2-AS3Q9BTD1 123 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 HOXB4P17483 251 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 Q56UQ5 140 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 BPIFA4PQ86YQ2 179 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 OR4F17Q8NGA8 305 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 GTSF1Q8WW33 167 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 TMEM14CQ9P0S9 112 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 ZMAT5Q9UDW3 170 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 H3BRN7 92 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 WIPF2Q8TF74 440 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 FANCD2OSQ96PS1 177 aa11.73□□□□□ -0.53
VIPAS39-202ENST00000343765 KIR2DL5BA0A0G2JN68 375 aa11.72□□□□□ -0.53
VIPAS39-202ENST00000343765 KIR2DL5BA0A0G2JPC4 375 aa11.72□□□□□ -0.53
VIPAS39-202ENST00000343765 EREGO14944 169 aa11.72□□□□□ -0.53
VIPAS39-202ENST00000343765 HLA-DRB1P01911 266 aa11.72□□□□□ -0.53
VIPAS39-202ENST00000343765 KIR2DL5AQ8N109 375 aa11.72□□□□□ -0.53
VIPAS39-202ENST00000343765 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
VIPAS39-202ENST00000343765 COL8A1P27658 744 aa11.72□□□□□ -0.53
VIPAS39-202ENST00000343765 DTX2Q86UW9 622 aa11.72□□□□□ -0.53
VIPAS39-202ENST00000343765 C19orf71A6NCJ1 209 aa11.71□□□□□ -0.53
VIPAS39-202ENST00000343765 A8MWL6 223 aa11.71□□□□□ -0.53
VIPAS39-202ENST00000343765 M0R3E3 92 aa11.71□□□□□ -0.53
VIPAS39-202ENST00000343765 OR2J3O76001 311 aa11.71□□□□□ -0.53
VIPAS39-202ENST00000343765 TMEM11P17152 192 aa11.71□□□□□ -0.53
VIPAS39-202ENST00000343765 RASL11AQ6T310 242 aa11.71□□□□□ -0.53
VIPAS39-202ENST00000343765 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
VIPAS39-202ENST00000343765 SMIM12Q96EX1 92 aa11.71□□□□□ -0.53
VIPAS39-202ENST00000343765 IGHV3OR16-8A0A075B7F1 116 aa11.71□□□□□ -0.54
VIPAS39-202ENST00000343765 IGLV2-11P01706 119 aa11.71□□□□□ -0.54
VIPAS39-202ENST00000343765 HBBP68871 147 aa11.71□□□□□ -0.54
VIPAS39-202ENST00000343765 CCDC144NLQ6NUI1 221 aa11.71□□□□□ -0.54
VIPAS39-202ENST00000343765 ZNF562Q6V9R5 426 aa11.71□□□□□ -0.54
VIPAS39-202ENST00000343765 VAMP8Q9BV40 100 aa11.71□□□□□ -0.54
VIPAS39-202ENST00000343765 PRSS22Q9GZN4 317 aa11.71□□□□□ -0.54
VIPAS39-202ENST00000343765 IGLV11-55A0A075B6I3 123 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 IGHV3-35A0A0C4DH35 117 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 DIRC3C9JPN6 131 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 UQCRFS1P47985 274 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 FOXA3P55318 350 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 RNASEKQ6P5S7 137 aaKnown RBP11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 ZNF705AQ6ZN79 300 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 A0A1B0GXF2 115 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 OR2T8A6NH00 312 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 RNF224P0DH78 156 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 IGLC2P0DOY2 106 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 MFAP4P55083 255 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 FAM120AOSQ5T036 256 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 LPAR2Q9HBW0 351 aa11.7□□□□□ -0.54
VIPAS39-202ENST00000343765 NDUFB8O95169 186 aa11.69□□□□□ -0.54
VIPAS39-202ENST00000343765 SIGLEC15Q6ZMC9 328 aa11.69□□□□□ -0.54
VIPAS39-202ENST00000343765 ALKBH7Q9BT30 221 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-202ENST00000343765 ZNF492Q9P255 531 aa11.69□□□□□ -0.54
VIPAS39-202ENST00000343765 M0QZ24 198 aa11.69□□□□□ -0.54
VIPAS39-202ENST00000343765 NIT1Q86X76 327 aa11.69□□□□□ -0.54
VIPAS39-202ENST00000343765 ZC2HC1AQ96GY0 325 aa11.69□□□□□ -0.54
VIPAS39-202ENST00000343765 C21orf62Q9NYP8 219 aa11.69□□□□□ -0.54
VIPAS39-202ENST00000343765 NPIPB5A8MRT5 1133 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 F8W735 103 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 HSBP1O75506 76 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 ATP5L2Q7Z4Y8 100 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 ACACBO00763 2458 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 IGSF10Q6WRI0 2623 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 WI2-2373I1.2A0A1W2PRP0 233 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 Q8N976 141 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 CACNA1AO00555 2505 aa11.68□□□□□ -0.54
VIPAS39-202ENST00000343765 RBPMS2Q6ZRY4 209 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 SNHG12Q9BXW3 62 aa11.67□□□□□ -0.54
VIPAS39-202ENST00000343765 BPESC1Q9GZL8 116 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms