RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 FAM223AQ8IWN6 122 aa15.52■□□□□ 0.08
RTN1-202ENST00000342503 C17orf77Q96MU5 243 aa15.52■□□□□ 0.08
RTN1-202ENST00000342503 RPH3ALQ9UNE2 315 aa15.52■□□□□ 0.08
RTN1-202ENST00000342503 PRRC2AP48634 2157 aaKnown RBP15.52■□□□□ 0.07
RTN1-202ENST00000342503 TRBV19A0A075B6N1 114 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 TGOLN2O43493 480 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 PPIFP30405 207 aaKnown RBP15.51■□□□□ 0.07
RTN1-202ENST00000342503 TOMM20LQ6UXN7 152 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 C5orf17Q8NAS9 161 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 RNF24Q9Y225 148 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 APCP25054 2843 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 GCGP01275 180 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 TMEM183BQ1AE95 376 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 KCNIP4Q6PIL6 250 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 EXOC3-AS1Q8N2X6 119 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 IMMP2LQ96T52 175 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 ZFAND3Q9H8U3 227 aa15.51■□□□□ 0.07
RTN1-202ENST00000342503 IGHV3OR16-8A0A075B7F1 116 aa15.5■□□□□ 0.07
RTN1-202ENST00000342503 A0A1W2PPQ1 181 aa15.5■□□□□ 0.07
RTN1-202ENST00000342503 BMPR1BO00238 502 aa15.5■□□□□ 0.07
RTN1-202ENST00000342503 ISLRO14498 428 aa15.5■□□□□ 0.07
RTN1-202ENST00000342503 GGCTO75223 188 aaKnown RBP15.5■□□□□ 0.07
RTN1-202ENST00000342503 C9orf139Q6ZV77 190 aa15.5■□□□□ 0.07
RTN1-202ENST00000342503 ATG101Q9BSB4 218 aa15.5■□□□□ 0.07
RTN1-202ENST00000342503 H3BUA1 57 aa15.49■□□□□ 0.07
RTN1-202ENST00000342503 AP4M1O00189 453 aa15.49■□□□□ 0.07
RTN1-202ENST00000342503 MGST1P10620 155 aaKnown RBP15.49■□□□□ 0.07
RTN1-202ENST00000342503 FAM3BP58499 235 aaPredicted RBP15.49■□□□□ 0.07
RTN1-202ENST00000342503 TPPP2P59282 170 aa15.49■□□□□ 0.07
RTN1-202ENST00000342503 ERVFC1-1P60608 527 aa15.49■□□□□ 0.07
RTN1-202ENST00000342503 NHLRC2Q8NBF2 726 aa15.49■□□□□ 0.07
RTN1-202ENST00000342503 BIN3Q9NQY0 253 aa15.49■□□□□ 0.07
RTN1-202ENST00000342503 NAV2Q8IVL1 2488 aa15.49■□□□□ 0.07
RTN1-202ENST00000342503 SLC17A3O00476 420 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 BRI3O95415 125 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 TCRAP04437 139 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 UBE2G1P62253 170 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 BAGE2Q86Y30 109 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 WFDC11Q8NEX6 87 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 SAV1Q9H4B6 383 aaPredicted RBP15.48■□□□□ 0.07
RTN1-202ENST00000342503 KLF12Q9Y4X4 402 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 CSPG4Q6UVK1 2322 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 PPP5D1E7EU14 171 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 TRGC2P03986 189 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 OR5R1Q8NH85 324 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 SGK494Q96LW2 274 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 ATP6V0BQ99437 205 aa15.48■□□□□ 0.07
RTN1-202ENST00000342503 RNASE7Q9H1E1 156 aaKnown RBP15.48■□□□□ 0.07
RTN1-202ENST00000342503 RPL15P61313 204 aaKnown RBP15.47■□□□□ 0.07
RTN1-202ENST00000342503 FOXL1Q12952 345 aa15.47■□□□□ 0.07
RTN1-202ENST00000342503 Q6YL49 198 aa15.47■□□□□ 0.07
RTN1-202ENST00000342503 SIGLEC15Q6ZMC9 328 aa15.47■□□□□ 0.07
RTN1-202ENST00000342503 OSTCQ9NRP0 149 aa15.47■□□□□ 0.07
RTN1-202ENST00000342503 V9GYV3 84 aa15.47■□□□□ 0.07
RTN1-202ENST00000342503 S100A9P06702 114 aaKnown RBP15.46■□□□□ 0.07
RTN1-202ENST00000342503 S100A7P31151 101 aa15.46■□□□□ 0.07
RTN1-202ENST00000342503 LYPD1Q8N2G4 141 aa15.46■□□□□ 0.07
RTN1-202ENST00000342503 CIARTQ8N365 385 aaPredicted RBP15.46■□□□□ 0.07
RTN1-202ENST00000342503 CMTM2Q8TAZ6 248 aa15.46■□□□□ 0.07
RTN1-202ENST00000342503 SRD5A3Q9H8P0 318 aa15.46■□□□□ 0.07
RTN1-202ENST00000342503 IL36BQ9NZH7 164 aa15.46■□□□□ 0.07
RTN1-202ENST00000342503 RPL7P18124 248 aaKnown RBP15.46■□□□□ 0.06
RTN1-202ENST00000342503 CFHR3Q02985 330 aa15.46■□□□□ 0.06
RTN1-202ENST00000342503 RELQ04864 619 aaPredicted RBP15.46■□□□□ 0.06
RTN1-202ENST00000342503 OR8I2Q8N0Y5 310 aa15.46■□□□□ 0.06
RTN1-202ENST00000342503 FMC1Q96HJ9 113 aa15.46■□□□□ 0.06
RTN1-202ENST00000342503 KLK15Q9H2R5 256 aa15.46■□□□□ 0.06
RTN1-202ENST00000342503 CLPSL1A2RUU4 121 aa15.45■□□□□ 0.06
RTN1-202ENST00000342503 IGLV1-40P01703 118 aa15.45■□□□□ 0.06
RTN1-202ENST00000342503 S100A6P06703 90 aa15.45■□□□□ 0.06
RTN1-202ENST00000342503 PF4V1P10720 104 aa15.45■□□□□ 0.06
RTN1-202ENST00000342503 SNRPEP62304 92 aaKnown RBP15.45■□□□□ 0.06
RTN1-202ENST00000342503 TMEM95Q3KNT9 176 aa15.45■□□□□ 0.06
RTN1-202ENST00000342503 USMG5Q96IX5 58 aa15.45■□□□□ 0.06
RTN1-202ENST00000342503 VPREB3Q9UKI3 123 aa15.45■□□□□ 0.06
RTN1-202ENST00000342503 SMAD5-AS1Q9Y6J3 95 aa15.45■□□□□ 0.06
RTN1-202ENST00000342503 TYMSP04818 313 aa15.44■□□□□ 0.06
RTN1-202ENST00000342503 PDE6HQ13956 83 aa15.44■□□□□ 0.06
RTN1-202ENST00000342503 IBA57Q5T440 356 aaKnown RBP15.44■□□□□ 0.06
RTN1-202ENST00000342503 TMEM190Q8WZ59 177 aa15.44■□□□□ 0.06
RTN1-202ENST00000342503 ZNF580Q9UK33 172 aa15.44■□□□□ 0.06
RTN1-202ENST00000342503 ZANQ9Y493 2812 aa15.44■□□□□ 0.06
RTN1-202ENST00000342503 SMAD7O15105 426 aaKnown RBP15.43■□□□□ 0.06
RTN1-202ENST00000342503 ARL3P36405 182 aa15.43■□□□□ 0.06
RTN1-202ENST00000342503 GOLT1AQ6ZVE7 132 aa15.43■□□□□ 0.06
RTN1-202ENST00000342503 ZNF320A2RRD8 509 aa15.43■□□□□ 0.06
RTN1-202ENST00000342503 PHOX2AO14813 284 aa15.43■□□□□ 0.06
RTN1-202ENST00000342503 RPEL1Q2QD12 228 aa15.43■□□□□ 0.06
RTN1-202ENST00000342503 LCNL1Q6ZST4 164 aa15.43■□□□□ 0.06
RTN1-202ENST00000342503 GPR82Q96P67 336 aa15.43■□□□□ 0.06
RTN1-202ENST00000342503 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.42■□□□□ 0.06
RTN1-202ENST00000342503 C5orf52A6NGY3 159 aa15.42■□□□□ 0.06
RTN1-202ENST00000342503 BUB3O43684 328 aa15.42■□□□□ 0.06
RTN1-202ENST00000342503 LTAP01374 205 aa15.42■□□□□ 0.06
RTN1-202ENST00000342503 TRBV12-3P01733 135 aa15.42■□□□□ 0.06
RTN1-202ENST00000342503 IGHV3-11P01762 117 aa15.42■□□□□ 0.06
RTN1-202ENST00000342503 FRZBQ92765 325 aa15.42■□□□□ 0.06
RTN1-202ENST00000342503 SMIM12Q96EX1 92 aa15.42■□□□□ 0.06
RTN1-202ENST00000342503 TRAV8-1A0A0A6YYK1 113 aa15.41■□□□□ 0.06
RTN1-202ENST00000342503 HOXA3O43365 443 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms