RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 RABAC1Q9UI14 185 aa13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 TMEM89A2RUT3 159 aa13.21□□□□□ -0.3
FRMD4A-202ENST00000342409 ARL3P36405 182 aa13.21□□□□□ -0.3
FRMD4A-202ENST00000342409 RANP62826 216 aaKnown RBP13.21□□□□□ -0.3
FRMD4A-202ENST00000342409 PNRC1Q12796 327 aaPredicted RBP13.21□□□□□ -0.3
FRMD4A-202ENST00000342409 SERTAD4Q9NUC0 356 aa13.21□□□□□ -0.3
FRMD4A-202ENST00000342409 HIVEP1P15822 2718 aa13.21□□□□□ -0.3
FRMD4A-202ENST00000342409 PGPEP1LA6NFU8 196 aa13.2□□□□□ -0.3
FRMD4A-202ENST00000342409 RPL15P61313 204 aaKnown RBP13.2□□□□□ -0.3
FRMD4A-202ENST00000342409 BPIFA4PQ86YQ2 179 aa13.2□□□□□ -0.3
FRMD4A-202ENST00000342409 OR4X2Q8NGF9 303 aa13.2□□□□□ -0.3
FRMD4A-202ENST00000342409 TMEM160Q9NX00 188 aa13.2□□□□□ -0.3
FRMD4A-202ENST00000342409 BMPR1BO00238 502 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 LY6G6DO95868 133 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 HIVEP2P31629 2446 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 RPL35P42766 123 aaKnown RBP13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 MYOZ3Q8TDC0 251 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 SMAD5-AS1Q9Y6J3 95 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 U3KQE9 123 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 TRBV19A0A075B6N1 114 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 A0A087WWC5 75 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 A0A0G2JLM5 398 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 GNG5P63218 68 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 RELQ04864 619 aaPredicted RBP13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 ADIRFQ15847 76 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 LINC01551Q86U37 167 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 Q9H3A6 140 aa13.19□□□□□ -0.3
FRMD4A-202ENST00000342409 NSD1Q96L73 2696 aaPredicted RBP13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 PGPA6NDG6 321 aa13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 FAM181BA6NEQ2 426 aa13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 SLC17A3O00476 420 aa13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 APOHP02749 345 aaPredicted RBP13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 RPLP1P05386 114 aaKnown RBP13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 HNF1AP20823 631 aa13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 UNQ9165/PRO28630Q6UXU0 137 aa13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 SMCO4Q9NRQ5 59 aa13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 AURKAIP1Q9NWT8 199 aaPredicted RBP13.18□□□□□ -0.3
FRMD4A-202ENST00000342409 B4DEV8 164 aa13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 ZNF207O43670 478 aaKnown RBP13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 BUB3O43684 328 aa13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 FOXE3Q13461 319 aa13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 Q6ZSV7 163 aa13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 RNF152Q8N8N0 203 aa13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 YPEL4Q96NS1 127 aa13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 FLNBO75369 2602 aaKnown RBP13.17□□□□□ -0.3
FRMD4A-202ENST00000342409 C9JCJ5 164 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 PEX7O00628 323 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 TSPAN4O14817 238 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 RNF212Q495C1 297 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 SIGLEC15Q6ZMC9 328 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 S100A7AQ86SG5 101 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 OR4F17Q8NGA8 305 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 OCC1Q8TAD7 63 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 ISOC2Q96AB3 205 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 IGF2BP2-AS1Q96M15 143 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 OR5B12Q96R08 314 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 EPDR1Q9UM22 224 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 COLCA2A8K830 154 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 ELANEP08246 267 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 TEX38Q6PEX7 206 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 TUBA4BQ9H853 241 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
FRMD4A-202ENST00000342409 HELTA6NFD8 242 aa13.15□□□□□ -0.3
FRMD4A-202ENST00000342409 CLDN34H7C241 214 aa13.15□□□□□ -0.3
FRMD4A-202ENST00000342409 K7EN84 100 aa13.15□□□□□ -0.3
FRMD4A-202ENST00000342409 NDUFA4O00483 81 aa13.15□□□□□ -0.3
FRMD4A-202ENST00000342409 IGLV2-8P01709 118 aa13.15□□□□□ -0.3
FRMD4A-202ENST00000342409 SLC25A5P05141 298 aaKnown RBP13.15□□□□□ -0.3
FRMD4A-202ENST00000342409 IGHV3OR16-13A0A075B7E8 117 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 IGHV3-49A0A0A0MS15 119 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 IGHV3-74A0A0B4J1X5 117 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 IGHV3-66A0A0C4DH42 116 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 RPL7P18124 248 aaKnown RBP13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 SLC35B1P78383 322 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 CENPWQ5EE01 88 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 OR8I2Q8N0Y5 310 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 C5orf17Q8NAS9 161 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 TCEAL7Q9BRU2 100 aa13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 PEF1Q9UBV8 284 aaKnown RBP13.14□□□□□ -0.31
FRMD4A-202ENST00000342409 TRAV34A0A0B4J273 112 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 METTL26Q96S19 204 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 RNF24Q9Y225 148 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 LY96Q9Y6Y9 160 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 FAM209BQ5JX69 171 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 CDC42EP3Q9UKI2 254 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 TMA7Q9Y2S6 64 aaKnown RBP13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 KLF12Q9Y4X4 402 aa13.13□□□□□ -0.31
FRMD4A-202ENST00000342409 ISLRO14498 428 aa13.12□□□□□ -0.31
FRMD4A-202ENST00000342409 TCRAP04437 139 aa13.12□□□□□ -0.31
FRMD4A-202ENST00000342409 SRD5A1P18405 259 aa13.12□□□□□ -0.31
FRMD4A-202ENST00000342409 PDE6HQ13956 83 aa13.12□□□□□ -0.31
FRMD4A-202ENST00000342409 TCTEX1D4Q5JR98 221 aa13.12□□□□□ -0.31
FRMD4A-202ENST00000342409 LYPD1Q8N2G4 141 aa13.12□□□□□ -0.31
FRMD4A-202ENST00000342409 TMEM242Q9NWH2 141 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms