RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 DKK2Q9UBU2 259 aa14.82□□□□□ -0.04
SMPD1-201ENST00000342245 IGHV3-64DA0A0J9YX35 117 aa14.82□□□□□ -0.04
SMPD1-201ENST00000342245 PRDX2P32119 198 aa14.82□□□□□ -0.04
SMPD1-201ENST00000342245 SAA2P0DJI9 122 aaPredicted RBP14.81□□□□□ -0.04
SMPD1-201ENST00000342245 XGP55808 180 aa14.81□□□□□ -0.04
SMPD1-201ENST00000342245 HERV-K104P63124 156 aa14.81□□□□□ -0.04
SMPD1-201ENST00000342245 HHLA3Q9XRX5 114 aa14.81□□□□□ -0.04
SMPD1-201ENST00000342245 LINC01619G3V211 115 aa14.81□□□□□ -0.04
SMPD1-201ENST00000342245 IGKCP01834 107 aa14.81□□□□□ -0.04
SMPD1-201ENST00000342245 FAM104BQ5XKR9 115 aa14.81□□□□□ -0.04
SMPD1-201ENST00000342245 ZNF562Q6V9R5 426 aa14.81□□□□□ -0.04
SMPD1-201ENST00000342245 ZCCHC24Q8N2G6 241 aaKnown RBP14.81□□□□□ -0.04
SMPD1-201ENST00000342245 TMEM178AQ8NBL3 297 aa14.81□□□□□ -0.04
SMPD1-201ENST00000342245 CFHR2P36980 270 aa14.8□□□□□ -0.04
SMPD1-201ENST00000342245 MPV17P39210 176 aa14.8□□□□□ -0.04
SMPD1-201ENST00000342245 ZFAND6Q6FIF0 208 aa14.8□□□□□ -0.04
SMPD1-201ENST00000342245 CD177Q8N6Q3 437 aa14.8□□□□□ -0.04
SMPD1-201ENST00000342245 RAX2Q96IS3 184 aa14.8□□□□□ -0.04
SMPD1-201ENST00000342245 WI2-2373I1.2A0A1W2PRP0 233 aa14.8□□□□□ -0.04
SMPD1-201ENST00000342245 CXorf67Q86X51 503 aaPredicted RBP14.8□□□□□ -0.04
SMPD1-201ENST00000342245 CIARTQ8N365 385 aaPredicted RBP14.8□□□□□ -0.04
SMPD1-201ENST00000342245 OSR1Q8TAX0 266 aaPredicted RBP14.8□□□□□ -0.04
SMPD1-201ENST00000342245 AKIRIN1Q9H9L7 192 aaPredicted RBP14.8□□□□□ -0.04
SMPD1-201ENST00000342245 IGKV2D-26A0A0A0MRZ7 120 aa14.79□□□□□ -0.04
SMPD1-201ENST00000342245 HOXB4P17483 251 aaPredicted RBP14.79□□□□□ -0.04
SMPD1-201ENST00000342245 ALKBH6Q3KRA9 238 aa14.79□□□□□ -0.04
SMPD1-201ENST00000342245 NPIPB3Q92617 1050 aa14.79□□□□□ -0.04
SMPD1-201ENST00000342245 NDUFA4L2Q9NRX3 87 aa14.79□□□□□ -0.04
SMPD1-201ENST00000342245 CALYQ9NYX4 217 aa14.79□□□□□ -0.04
SMPD1-201ENST00000342245 MRPS17Q9Y2R5 130 aaKnown RBP14.79□□□□□ -0.04
SMPD1-201ENST00000342245 IGKV1D-37A0A075B6S9 117 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 ATP5LO75964 103 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 MZT1Q08AG7 82 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 ODF1Q14990 250 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 CFAP126Q5VTH2 177 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 AMTNQ6UX39 209 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 C1orf229Q6ZS94 237 aaPredicted RBP14.78□□□□□ -0.04
SMPD1-201ENST00000342245 PPDPFLQ8WWR9 84 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 IGHV5-10-1A0A0J9YXX1 117 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 TMEM262E9PQX1 116 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 TWIST1Q15672 202 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 DLX4Q92988 240 aaPredicted RBP14.78□□□□□ -0.04
SMPD1-201ENST00000342245 SSUH2Q9Y2M2 353 aa14.78□□□□□ -0.04
SMPD1-201ENST00000342245 LINC01546A6NGU7 62 aa14.77□□□□□ -0.04
SMPD1-201ENST00000342245 B5MCH6 92 aa14.77□□□□□ -0.04
SMPD1-201ENST00000342245 C16orf97H3BN30 126 aa14.77□□□□□ -0.04
SMPD1-201ENST00000342245 TFF1P04155 84 aa14.77□□□□□ -0.04
SMPD1-201ENST00000342245 GP9P14770 177 aa14.77□□□□□ -0.04
SMPD1-201ENST00000342245 PRNTQ86SH4 94 aa14.77□□□□□ -0.04
SMPD1-201ENST00000342245 TEX29Q8N6K0 151 aa14.77□□□□□ -0.04
SMPD1-201ENST00000342245 DPM2O94777 84 aa14.77□□□□□ -0.05
SMPD1-201ENST00000342245 PEAR1Q5VY43 1037 aaPredicted RBP14.77□□□□□ -0.05
SMPD1-201ENST00000342245 TMEM133Q9H2Q1 129 aa14.77□□□□□ -0.05
SMPD1-201ENST00000342245 UFC1Q9Y3C8 167 aa14.77□□□□□ -0.05
SMPD1-201ENST00000342245 CNTRLQ7Z7A1 2325 aa14.76□□□□□ -0.05
SMPD1-201ENST00000342245 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
SMPD1-201ENST00000342245 TMEM75Q8N9X5 138 aa14.76□□□□□ -0.05
SMPD1-201ENST00000342245 TMEM158Q8WZ71 300 aa14.76□□□□□ -0.05
SMPD1-201ENST00000342245 CACNA1DQ01668 2161 aa14.76□□□□□ -0.05
SMPD1-201ENST00000342245 PLAUP00749 431 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 IGLV2-11P01706 119 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 ORM2P19652 201 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 IL11RAQ14626 422 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 C3AR1Q16581 482 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 LYRM7Q5U5X0 104 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 GUSBP11Q6P575 273 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 KLF14Q8TD94 323 aaPredicted RBP14.75□□□□□ -0.05
SMPD1-201ENST00000342245 OR10X1Q8NGY0 326 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 HIST1H4GQ99525 98 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 TNFRSF18Q9Y5U5 241 aa14.75□□□□□ -0.05
SMPD1-201ENST00000342245 RPL32P62910 135 aaKnown RBP14.74□□□□□ -0.05
SMPD1-201ENST00000342245 TMEM30BQ3MIR4 351 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 TRGV9Q99603 122 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 FSCN3Q9NQT6 498 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 ASCC3Q8N3C0 2202 aaKnown RBP14.74□□□□□ -0.05
SMPD1-201ENST00000342245 PRRG2O14669 202 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 IGHV3-13P01766 116 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 CGB3P0DN86 165 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 CGB7P0DN87 165 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 FCER1GP30273 86 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 FHL3Q13643 280 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 MRPL51Q4U2R6 128 aaKnown RBP14.74□□□□□ -0.05
SMPD1-201ENST00000342245 FLYWCH2Q96CP2 140 aaKnown RBP14.74□□□□□ -0.05
SMPD1-201ENST00000342245 SLC25A39Q9BZJ4 359 aaPredicted RBP14.74□□□□□ -0.05
SMPD1-201ENST00000342245 TMEM14CQ9P0S9 112 aa14.74□□□□□ -0.05
SMPD1-201ENST00000342245 FREM1Q5H8C1 2179 aa14.73□□□□□ -0.05
SMPD1-201ENST00000342245 SAA1P0DJI8 122 aaPredicted RBP14.73□□□□□ -0.05
SMPD1-201ENST00000342245 CKS2P33552 79 aa14.73□□□□□ -0.05
SMPD1-201ENST00000342245 NFE4Q86UQ8 179 aa14.73□□□□□ -0.05
SMPD1-201ENST00000342245 MOGAT3Q86VF5 341 aa14.73□□□□□ -0.05
SMPD1-201ENST00000342245 A0A1W2PQM1 296 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 HOXA3O43365 443 aaPredicted RBP14.72□□□□□ -0.05
SMPD1-201ENST00000342245 PRSS1P07477 247 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 GOLT1AQ6ZVE7 132 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 MAP1LC3AQ9H492 121 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 CFAP54Q96N23 3096 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 IL4P05112 153 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 FOLR3P41439 243 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 SMCPP49901 116 aaPredicted RBP14.72□□□□□ -0.05
SMPD1-201ENST00000342245 ZC2HC1BQ5TFG8 222 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms