RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 OR10J3Q5JRS4 329 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 GDF5OSQ5U4N7 250 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 LINC00322Q6ZN03 302 aaPredicted RBP11.82□□□□□ -0.52
TPM3-208ENST00000341485 TSKUQ8WUA8 353 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 FMC1Q96HJ9 113 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 HSPB9Q9BQS6 159 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 CHRDL1Q9BU40 450 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 LTAP01374 205 aa11.81□□□□□ -0.52
TPM3-208ENST00000341485 PAX8Q06710 450 aa11.81□□□□□ -0.52
TPM3-208ENST00000341485 SLAQ13239 276 aa11.81□□□□□ -0.52
TPM3-208ENST00000341485 HES1Q14469 280 aa11.81□□□□□ -0.52
TPM3-208ENST00000341485 C5orf64Q2M2E5 130 aa11.81□□□□□ -0.52
TPM3-208ENST00000341485 DYNAPQ8N1N2 210 aa11.81□□□□□ -0.52
TPM3-208ENST00000341485 NEU1Q99519 415 aa11.81□□□□□ -0.52
TPM3-208ENST00000341485 OTORQ9NRC9 128 aa11.81□□□□□ -0.52
TPM3-208ENST00000341485 DEFB113Q30KQ7 82 aa11.8□□□□□ -0.52
TPM3-208ENST00000341485 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
TPM3-208ENST00000341485 RASL11AQ6T310 242 aa11.8□□□□□ -0.52
TPM3-208ENST00000341485 RBM14Q96PK6 669 aaKnown RBP11.8□□□□□ -0.52
TPM3-208ENST00000341485 RCHY1Q96PM5 261 aa11.8□□□□□ -0.52
TPM3-208ENST00000341485 SAMD10Q9BYL1 202 aa11.8□□□□□ -0.52
TPM3-208ENST00000341485 MSMBP08118 114 aa11.8□□□□□ -0.52
TPM3-208ENST00000341485 BRS3P32247 399 aa11.8□□□□□ -0.52
TPM3-208ENST00000341485 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
TPM3-208ENST00000341485 SHANK2-AS3Q9BTD1 123 aa11.8□□□□□ -0.52
TPM3-208ENST00000341485 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
TPM3-208ENST00000341485 H3BRN7 92 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 GPX1P07203 203 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 ZNF705DP0CH99 300 aaPredicted RBP11.79□□□□□ -0.52
TPM3-208ENST00000341485 ZNF705BP0CI00 300 aaPredicted RBP11.79□□□□□ -0.52
TPM3-208ENST00000341485 EXOC3-AS1Q8N2X6 119 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 PSMG3-AS1Q96PY0 264 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 NDUFAF3Q9BU61 184 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 C19orf71A6NCJ1 209 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 B4DSR2 109 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 ZNF253O75346 499 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 NDPQ00604 133 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 C1orf194Q5T5A4 169 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 LRRC75A-AS1Q8N1F1 130 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 KCNS1Q96KK3 526 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 PRSS22Q9GZN4 317 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 RPP21Q9H633 154 aaKnown RBP11.79□□□□□ -0.52
TPM3-208ENST00000341485 ZNF492Q9P255 531 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 S4R3C0 116 aa11.79□□□□□ -0.52
TPM3-208ENST00000341485 KIR2DL5BA0A0G2JN68 375 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 KIR2DL5BA0A0G2JPC4 375 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 A0A1W2PS18 150 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 NPFFO15130 113 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 SAA4P35542 130 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 TOMM20LQ6UXN7 152 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 TCF24Q7RTU0 167 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 Q86TA4 180 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 KIR2DL5AQ8N109 375 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 SIGLECL1Q8N7X8 197 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 FANCD2OSQ96PS1 177 aa11.78□□□□□ -0.52
TPM3-208ENST00000341485 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 CENPVL3A0A0U1RRI6 287 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 A0A1B0GXF2 115 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 IGLV2-11P01706 119 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 HIST2H2BCQ6DN03 193 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 Q71RC1 249 aaPredicted RBP11.77□□□□□ -0.52
TPM3-208ENST00000341485 Q8N6K4 173 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 RNF125Q96EQ8 232 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 C17orf77Q96MU5 243 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 FBXL7Q9UJT9 491 aa11.77□□□□□ -0.52
TPM3-208ENST00000341485 IGLV11-55A0A075B6I3 123 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 TRBV19A0A075B6N1 114 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 WI2-2373I1.2A0A1W2PRP0 233 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 NPIPB5A8MRT5 1133 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 IL4P05112 153 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 ZNF562Q6V9R5 426 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 TEX43Q6ZNM6 134 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 GOLT1AQ6ZVE7 132 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 ARPC1AQ92747 370 aa11.77□□□□□ -0.53
TPM3-208ENST00000341485 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 TRAV40A0A0B4J280 105 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 P01737 135 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 IGLC2P0DOY2 106 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 CT83Q5H943 113 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 Q5PR19 223 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 ATP5L2Q7Z4Y8 100 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 C18orf32Q8TCD1 76 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 SSBP4Q9BWG4 385 aaPredicted RBP11.76□□□□□ -0.53
TPM3-208ENST00000341485 HIF1ANQ9NWT6 349 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 LRRK2Q5S007 2527 aa11.76□□□□□ -0.53
TPM3-208ENST00000341485 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
TPM3-208ENST00000341485 MRPS12O15235 138 aaKnown RBP11.75□□□□□ -0.53
TPM3-208ENST00000341485 PMCHP20382 165 aa11.75□□□□□ -0.53
TPM3-208ENST00000341485 AMTP48728 403 aa11.75□□□□□ -0.53
TPM3-208ENST00000341485 CAMPP49913 170 aa11.75□□□□□ -0.53
TPM3-208ENST00000341485 EBI3Q14213 229 aa11.75□□□□□ -0.53
TPM3-208ENST00000341485 BCL6BQ8N143 479 aaPredicted RBP11.75□□□□□ -0.53
TPM3-208ENST00000341485 CIARTQ8N365 385 aaPredicted RBP11.75□□□□□ -0.53
TPM3-208ENST00000341485 TTC9CQ8N5M4 171 aa11.75□□□□□ -0.53
TPM3-208ENST00000341485 LINC01356Q8N9X3 169 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms