RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 NDUFA3O95167 84 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 IGLV2-11P01706 119 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 EXOC3-AS1Q8N2X6 119 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 NPBQ8NG41 125 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 DAZAP1Q96EP5 407 aaKnown RBP11.51□□□□□ -0.57
TDP2-201ENST00000341060 SHANK2-AS3Q9BTD1 123 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 RAB1BQ9H0U4 201 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 TRAV8-1A0A0A6YYK1 113 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 H3BRN7 92 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 CCL21O00585 134 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 TCAPO15273 167 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 CEACAM3P40198 252 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 RBPMS2Q6ZRY4 209 aaKnown RBP11.51□□□□□ -0.57
TDP2-201ENST00000341060 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 RNF24Q9Y225 148 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 USP24Q9UPU5 2620 aa11.51□□□□□ -0.57
TDP2-201ENST00000341060 TRBV19A0A075B6N1 114 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 TRBV6-1A0A0K0K1D8 114 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 TMEM8BA6NDV4 472 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 LY6HO94772 140 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 ARF6P62330 175 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 SPATA45Q537H7 98 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 TIMD4Q96H15 378 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 HILPDAQ9Y5L2 63 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 IGSF10Q6WRI0 2623 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 A6NNC1 897 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 M0R1W7 72 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 COL8A1P27658 744 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 GOLT1AQ6ZVE7 132 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 ZNF491Q8N8L2 437 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
TDP2-201ENST00000341060 FAM181BA6NEQ2 426 aa11.49□□□□□ -0.57
TDP2-201ENST00000341060 ODF3BA8MYP8 253 aa11.49□□□□□ -0.57
TDP2-201ENST00000341060 M0R2Z0 102 aa11.49□□□□□ -0.57
TDP2-201ENST00000341060 IGLC2P0DOY2 106 aa11.49□□□□□ -0.57
TDP2-201ENST00000341060 CDSNQ15517 529 aa11.49□□□□□ -0.57
TDP2-201ENST00000341060 RNASEKQ6P5S7 137 aaKnown RBP11.49□□□□□ -0.57
TDP2-201ENST00000341060 CIARTQ8N365 385 aaPredicted RBP11.49□□□□□ -0.57
TDP2-201ENST00000341060 PGLYRP4Q96LB8 373 aa11.49□□□□□ -0.57
TDP2-201ENST00000341060 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 PRNTQ86SH4 94 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 LYPD1Q8N2G4 141 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 OR4F17Q8NGA8 305 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 CFAP46Q8IYW2 2715 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 IL4P05112 153 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 KLRD1Q13241 179 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 FAM162BQ5T6X4 162 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 SIGLEC15Q6ZMC9 328 aa11.48□□□□□ -0.57
TDP2-201ENST00000341060 CACNA1BQ00975 2339 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 TOX4O94842 621 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 RPLP1P05386 114 aaKnown RBP11.47□□□□□ -0.57
TDP2-201ENST00000341060 PRTN3P24158 256 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 ADORA2A-AS1P86434 159 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 PMCHL1Q16048 86 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 C5orf64Q2M2E5 130 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 C11orf71Q6IPW1 123 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 URB1-AS1Q96HZ7 61 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 WI2-2373I1.2A0A1W2PRP0 233 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 MRPS12O15235 138 aaKnown RBP11.47□□□□□ -0.57
TDP2-201ENST00000341060 HLA-DRB1P01911 266 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 BTF3P20290 206 aaKnown RBP11.47□□□□□ -0.57
TDP2-201ENST00000341060 CD24P25063 80 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 EBLN2Q6P2I7 272 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 Q71RC1 249 aaPredicted RBP11.47□□□□□ -0.57
TDP2-201ENST00000341060 C17orf77Q96MU5 243 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 ZNF48Q96MX3 618 aaPredicted RBP11.47□□□□□ -0.57
TDP2-201ENST00000341060 ZFP30Q9Y2G7 519 aa11.47□□□□□ -0.57
TDP2-201ENST00000341060 TRAV30A0A087WSZ9 112 aa11.46□□□□□ -0.57
TDP2-201ENST00000341060 C2orf70A6NJV1 201 aa11.46□□□□□ -0.57
TDP2-201ENST00000341060 NPIPB5A8MRT5 1133 aa11.46□□□□□ -0.57
TDP2-201ENST00000341060 APOHP02749 345 aaPredicted RBP11.46□□□□□ -0.57
TDP2-201ENST00000341060 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
TDP2-201ENST00000341060 FOXA3P55318 350 aaPredicted RBP11.46□□□□□ -0.57
TDP2-201ENST00000341060 FBLN7Q53RD9 439 aa11.46□□□□□ -0.57
TDP2-201ENST00000341060 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.57
TDP2-201ENST00000341060 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.58
TDP2-201ENST00000341060 ZFYVE26Q68DK2 2539 aa11.46□□□□□ -0.58
TDP2-201ENST00000341060 IGLV11-55A0A075B6I3 123 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 ZNF785A8K8V0 405 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 K7EQM0 130 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 HAX1O00165 279 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 SFTPCP11686 197 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 HES1Q14469 280 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 KLF17Q5JT82 389 aaPredicted RBP11.45□□□□□ -0.58
TDP2-201ENST00000341060 PRR31Q5SQ13 230 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 NEU4Q8WWR8 484 aaPredicted RBP11.45□□□□□ -0.58
TDP2-201ENST00000341060 ZC2HC1AQ96GY0 325 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 ZNF414Q96IQ9 312 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 EPG5Q9HCE0 2579 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 LOC102724200A0A096LPH7 203 aaPredicted RBP11.45□□□□□ -0.58
TDP2-201ENST00000341060 OVOL3O00110 214 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 CHEK1O14757 476 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 GNG7O60262 68 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 PSG3Q16557 428 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 KLHDC1Q8N7A1 406 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 IGFBPL1Q8WX77 278 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 CHCHD1Q96BP2 118 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms