RNA–Protein interactions for RNA: ENST00000341040.11

LCN10-201, Transcript of lipocalin 10, humanhuman

TSL 1 (best)

Gene LCN10, Length 1,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN10-201ENST00000341040 SEPSECSQ9HD40 501 aaKnown RBP11.35□□□□□ -0.59
LCN10-201ENST00000341040 FUT9Q9Y231 359 aa11.35□□□□□ -0.59
LCN10-201ENST00000341040 HELTA6NFD8 242 aa11.34□□□□□ -0.59
LCN10-201ENST00000341040 RPL7P18124 248 aaKnown RBP11.34□□□□□ -0.59
LCN10-201ENST00000341040 RAB5CP51148 216 aa11.34□□□□□ -0.59
LCN10-201ENST00000341040 TAS2R45P59539 299 aa11.34□□□□□ -0.59
LCN10-201ENST00000341040 C16orf54Q6UWD8 224 aa11.34□□□□□ -0.59
LCN10-201ENST00000341040 SORL1Q92673 2214 aa11.34□□□□□ -0.59
LCN10-201ENST00000341040 IZUMO1RA6ND01 250 aa11.33□□□□□ -0.59
LCN10-201ENST00000341040 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.59
LCN10-201ENST00000341040 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.59
LCN10-201ENST00000341040 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.59
LCN10-201ENST00000341040 RPRMQ9NS64 109 aa11.33□□□□□ -0.59
LCN10-201ENST00000341040 NOTCH1P46531 2555 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 GALR1P47211 349 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 DEFB114Q30KQ6 69 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
LCN10-201ENST00000341040 SAMD5Q5TGI4 173 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 DPPA3Q6W0C5 159 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 SIGLEC15Q6ZMC9 328 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 RBPMS2Q6ZRY4 209 aaKnown RBP11.33□□□□□ -0.6
LCN10-201ENST00000341040 BPIFA4PQ86YQ2 179 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 RPP25LQ8N5L8 163 aaKnown RBP11.33□□□□□ -0.6
LCN10-201ENST00000341040 STXBP6Q8NFX7 210 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 OR2K2Q8NGT1 345 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 GLMPQ8WWB7 406 aa11.33□□□□□ -0.6
LCN10-201ENST00000341040 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
LCN10-201ENST00000341040 IGLV1-51P01701 117 aa11.32□□□□□ -0.6
LCN10-201ENST00000341040 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
LCN10-201ENST00000341040 KHDC3LQ587J8 217 aa11.32□□□□□ -0.6
LCN10-201ENST00000341040 MIR17HGQ75NE6 70 aa11.32□□□□□ -0.6
LCN10-201ENST00000341040 TCF24Q7RTU0 167 aa11.32□□□□□ -0.6
LCN10-201ENST00000341040 TRAV25A0A0B4J276 109 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 LCN12Q6JVE5 192 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 SULT1A2P50226 295 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 PAFAH1B2P68402 229 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 MORN5Q5VZ52 161 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 SPATA31B1PQ5VZV4 182 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 ALKAL2Q6UX46 152 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 RAB24Q969Q5 203 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
LCN10-201ENST00000341040 TRAV5A0A0B4J249 113 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 WIPF1O43516 503 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 OR7C2O60412 319 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 ATF4P18848 351 aaPredicted RBP11.3□□□□□ -0.6
LCN10-201ENST00000341040 MEOX2P50222 304 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 FAM90A2PQ658T7 463 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 PQLC2Q6ZP29 291 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 TMEM61Q8N0U2 210 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 FAM213BQ8TBF2 198 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 RNF141Q8WVD5 230 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 SLC25A2Q9BXI2 301 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 TMEM14CQ9P0S9 112 aa11.3□□□□□ -0.6
LCN10-201ENST00000341040 TSPAN4O14817 238 aa11.29□□□□□ -0.6
LCN10-201ENST00000341040 TEX261Q6UWH6 196 aa11.29□□□□□ -0.6
LCN10-201ENST00000341040 GBGT1Q8N5D6 347 aa11.29□□□□□ -0.6
LCN10-201ENST00000341040 OR51M1Q9H341 326 aa11.29□□□□□ -0.6
LCN10-201ENST00000341040 ZMAT5Q9UDW3 170 aaKnown RBP11.29□□□□□ -0.6
LCN10-201ENST00000341040 ZNF785A8K8V0 405 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 IFNA7P01567 189 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 PRB2P02812 416 aaPredicted RBP11.28□□□□□ -0.6
LCN10-201ENST00000341040 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 TFPI2P48307 235 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 GUCA2BQ16661 112 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 FAM167A-AS1Q96KT0 104 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
LCN10-201ENST00000341040 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 NRN1Q9NPD7 142 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
LCN10-201ENST00000341040 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
LCN10-201ENST00000341040 CXorf1O96002 111 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 GP9P14770 177 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 FHITP49789 147 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 FAM74A1Q5RGS3 127 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 WFDC3Q8IUB2 231 aa11.28□□□□□ -0.6
LCN10-201ENST00000341040 TEX46H3BTG2 121 aa11.27□□□□□ -0.61
LCN10-201ENST00000341040 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
LCN10-201ENST00000341040 H2AFB1P0C5Y9 115 aa11.27□□□□□ -0.61
LCN10-201ENST00000341040 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
LCN10-201ENST00000341040 ZNF726P1Q15940 193 aa11.27□□□□□ -0.61
LCN10-201ENST00000341040 GUK1Q16774 197 aa11.27□□□□□ -0.61
LCN10-201ENST00000341040 LRRC20Q8TCA0 184 aa11.27□□□□□ -0.61
LCN10-201ENST00000341040 PRR25Q96S07 402 aa11.27□□□□□ -0.61
LCN10-201ENST00000341040 HRH4Q9H3N8 390 aa11.27□□□□□ -0.61
LCN10-201ENST00000341040 A0A087X0K7 114 aa11.26□□□□□ -0.61
LCN10-201ENST00000341040 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
LCN10-201ENST00000341040 MAP1LC3B2A6NCE7 125 aa11.26□□□□□ -0.61
LCN10-201ENST00000341040 OR4C46A6NHA9 309 aa11.26□□□□□ -0.61
LCN10-201ENST00000341040 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
LCN10-201ENST00000341040 MRPS12O15235 138 aaKnown RBP11.26□□□□□ -0.61
LCN10-201ENST00000341040 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
LCN10-201ENST00000341040 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
LCN10-201ENST00000341040 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms