RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 PLP1P60201 277 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 PATE2Q6UY27 113 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 LINC00305Q7Z4B0 112 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 EIF4E3Q8N5X7 224 aaKnown RBP11.27□□□□□ -0.61
CSRP1-201ENST00000340006 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 ZNF414Q96IQ9 312 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 UHRF2Q96PU4 802 aa11.27□□□□□ -0.61
CSRP1-201ENST00000340006 S100A7P31151 101 aa11.26□□□□□ -0.61
CSRP1-201ENST00000340006 RHOBP62745 196 aa11.26□□□□□ -0.61
CSRP1-201ENST00000340006 CCL20P78556 96 aa11.26□□□□□ -0.61
CSRP1-201ENST00000340006 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
CSRP1-201ENST00000340006 OR9G4Q8NGQ1 327 aa11.26□□□□□ -0.61
CSRP1-201ENST00000340006 MRPL27Q9P0M9 148 aaKnown RBP11.26□□□□□ -0.61
CSRP1-201ENST00000340006 IGHV3-66A0A0C4DH42 116 aa11.25□□□□□ -0.61
CSRP1-201ENST00000340006 RAB19A4D1S5 217 aa11.25□□□□□ -0.61
CSRP1-201ENST00000340006 K7EMT4 169 aa11.25□□□□□ -0.61
CSRP1-201ENST00000340006 REC114Q7Z4M0 266 aa11.25□□□□□ -0.61
CSRP1-201ENST00000340006 ELOVL1Q9BW60 279 aa11.25□□□□□ -0.61
CSRP1-201ENST00000340006 SPATA31B1PQ5VZV4 182 aa11.25□□□□□ -0.61
CSRP1-201ENST00000340006 SLC25A39Q9BZJ4 359 aaPredicted RBP11.25□□□□□ -0.61
CSRP1-201ENST00000340006 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
CSRP1-201ENST00000340006 CBLN1P23435 193 aa11.24□□□□□ -0.61
CSRP1-201ENST00000340006 CRYBB3P26998 211 aa11.24□□□□□ -0.61
CSRP1-201ENST00000340006 LEMD1Q68G75 181 aa11.24□□□□□ -0.61
CSRP1-201ENST00000340006 FUT9Q9Y231 359 aa11.24□□□□□ -0.61
CSRP1-201ENST00000340006 VWFP04275 2813 aa11.24□□□□□ -0.61
CSRP1-201ENST00000340006 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 A0A1W2PS18 150 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 C2orf70A6NJV1 201 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 FOLR2P14207 255 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 MIR17HGQ75NE6 70 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 RNF2Q99496 336 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 SELENOKQ9Y6D0 94 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 A8MWP6 167 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 TSPAN4O14817 238 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 STAG3L2P0CL84 134 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 STAG3L3P0CL85 134 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 EDN2P20800 178 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 SRSF3P84103 164 aaKnown RBP11.23□□□□□ -0.61
CSRP1-201ENST00000340006 OR8I2Q8N0Y5 310 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 LINC00482Q8N8I6 264 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.23□□□□□ -0.61
CSRP1-201ENST00000340006 GRAMD2BQ96HH9 432 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 SMPXQ9UHP9 88 aa11.23□□□□□ -0.61
CSRP1-201ENST00000340006 TRAV5A0A0B4J249 113 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 ARL14EPLP0DKL9 152 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 CD33P20138 364 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 BMI1P35226 326 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 RPL11P62913 178 aaKnown RBP11.22□□□□□ -0.61
CSRP1-201ENST00000340006 MORN5Q5VZ52 161 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 MRPL32Q9BYC8 188 aaKnown RBP11.22□□□□□ -0.61
CSRP1-201ENST00000340006 EIF5A2Q9GZV4 153 aaKnown RBP11.22□□□□□ -0.61
CSRP1-201ENST00000340006 TMPRSS5Q9H3S3 457 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 TMEM231Q9H6L2 316 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 GNG13Q9P2W3 67 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 RNF24Q9Y225 148 aa11.22□□□□□ -0.61
CSRP1-201ENST00000340006 BUB3O43684 328 aa11.21□□□□□ -0.61
CSRP1-201ENST00000340006 SNAPINO95295 136 aa11.21□□□□□ -0.61
CSRP1-201ENST00000340006 SSTP61278 116 aa11.21□□□□□ -0.61
CSRP1-201ENST00000340006 GUK1Q16774 197 aa11.21□□□□□ -0.61
CSRP1-201ENST00000340006 UQCC3Q6UW78 93 aa11.21□□□□□ -0.61
CSRP1-201ENST00000340006 SHANK2-AS3Q9BTD1 123 aa11.21□□□□□ -0.61
CSRP1-201ENST00000340006 TRRAPQ9Y4A5 3859 aa11.21□□□□□ -0.61
CSRP1-201ENST00000340006 CHEK1O14757 476 aa11.21□□□□□ -0.62
CSRP1-201ENST00000340006 SAP30O75446 220 aa11.21□□□□□ -0.62
CSRP1-201ENST00000340006 CXorf1O96002 111 aa11.21□□□□□ -0.62
CSRP1-201ENST00000340006 CSN3P07498 182 aa11.21□□□□□ -0.62
CSRP1-201ENST00000340006 TAS2R45P59539 299 aa11.21□□□□□ -0.62
CSRP1-201ENST00000340006 HAGHQ16775 308 aa11.21□□□□□ -0.62
CSRP1-201ENST00000340006 TECRQ9NZ01 308 aaKnown RBP11.21□□□□□ -0.62
CSRP1-201ENST00000340006 RBFOX3A6NFN3 312 aa11.2□□□□□ -0.62
CSRP1-201ENST00000340006 H3BRN7 92 aa11.2□□□□□ -0.62
CSRP1-201ENST00000340006 C8orf88P0DMB2 117 aa11.2□□□□□ -0.62
CSRP1-201ENST00000340006 DYNLRB2Q8TF09 96 aa11.2□□□□□ -0.62
CSRP1-201ENST00000340006 LINC00052Q96N35 136 aa11.2□□□□□ -0.62
CSRP1-201ENST00000340006 U3KQE9 123 aa11.2□□□□□ -0.62
CSRP1-201ENST00000340006 CD5P06127 495 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 KHDC3LQ587J8 217 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 RARRES2Q99969 163 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 TREM1Q9NP99 234 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 IGKV3-7A0A075B6H7 116 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 OR7C2O60412 319 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 PSMB3P49720 205 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 C1orf194Q5T5A4 169 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 C16orf54Q6UWD8 224 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 PQLC2Q6ZP29 291 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 BPIFA4PQ86YQ2 179 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 SLC25A2Q9BXI2 301 aa11.19□□□□□ -0.62
CSRP1-201ENST00000340006 ZNF785A8K8V0 405 aa11.18□□□□□ -0.62
CSRP1-201ENST00000340006 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
CSRP1-201ENST00000340006 IFNA1P01562 189 aa11.18□□□□□ -0.62
CSRP1-201ENST00000340006 SNRPCP09234 159 aaKnown RBP11.18□□□□□ -0.62
CSRP1-201ENST00000340006 BCL2P10415 239 aa11.18□□□□□ -0.62
CSRP1-201ENST00000340006 GCHFRP30047 84 aa11.18□□□□□ -0.62
CSRP1-201ENST00000340006 FLI1Q01543 452 aaPredicted RBP11.18□□□□□ -0.62
CSRP1-201ENST00000340006 PMS2P11Q13670 270 aa11.18□□□□□ -0.62
CSRP1-201ENST00000340006 PEA15Q15121 130 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms