RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 VWC2LB2RUY7 222 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 EREGO14944 169 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 PLP1P60201 277 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 HES1Q14469 280 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 KLF17Q5JT82 389 aaPredicted RBP12.89□□□□□ -0.35
LITAF-201ENST00000339430 KIR2DL5AQ8N109 375 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 EXOC3-AS1Q8N2X6 119 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 FAM19A2Q8N3H0 131 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 C5orf17Q8NAS9 161 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 KCNS1Q96KK3 526 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 ZNF586Q9NXT0 402 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 TCRAP04437 139 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 TSKUQ8WUA8 353 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 DPM3Q9P2X0 92 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 PAM16Q9Y3D7 125 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 DOPEY2Q9Y3R5 2298 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 FBN2P35556 2912 aa12.88□□□□□ -0.35
LITAF-201ENST00000339430 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
LITAF-201ENST00000339430 Q71RC1 249 aaPredicted RBP12.88□□□□□ -0.35
LITAF-201ENST00000339430 NRN1Q9NPD7 142 aa12.88□□□□□ -0.35
LITAF-201ENST00000339430 WNK2Q9Y3S1 2297 aa12.88□□□□□ -0.35
LITAF-201ENST00000339430 K7EIM0 57 aa12.88□□□□□ -0.35
LITAF-201ENST00000339430 NBR2O15453 112 aa12.88□□□□□ -0.35
LITAF-201ENST00000339430 MLST8Q9BVC4 326 aa12.88□□□□□ -0.35
LITAF-201ENST00000339430 TOMM40O96008 361 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 NTF3P20783 257 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 PAX2Q02962 417 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 CFHR4Q92496 578 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 FMC1Q96HJ9 113 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 CHRDL1Q9BU40 450 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 TEX43Q6ZNM6 134 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 KIR3DL3Q8N743 410 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 WIPF2Q8TF74 440 aaPredicted RBP12.87□□□□□ -0.35
LITAF-201ENST00000339430 C17orf77Q96MU5 243 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 RBM14Q96PK6 669 aaKnown RBP12.87□□□□□ -0.35
LITAF-201ENST00000339430 ASCL2Q99929 193 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 RNF5Q99942 180 aa12.87□□□□□ -0.35
LITAF-201ENST00000339430 LOC105371242A0A075B767 164 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 LTAP01374 205 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 ATP5J2P56134 94 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 OR11H6Q8NGC7 330 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 C2orf88Q9BSF0 95 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 BPESC1Q9GZL8 116 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 RPP21Q9H633 154 aaKnown RBP12.86□□□□□ -0.35
LITAF-201ENST00000339430 PTPN13Q12923 2485 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 POLQO75417 2590 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 ZNF324O75467 553 aaPredicted RBP12.86□□□□□ -0.35
LITAF-201ENST00000339430 ZNF705AQ6ZN79 300 aaPredicted RBP12.86□□□□□ -0.35
LITAF-201ENST00000339430 GOLT1AQ6ZVE7 132 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 CIARTQ8N365 385 aaPredicted RBP12.86□□□□□ -0.35
LITAF-201ENST00000339430 MED13LQ71F56 2210 aa12.86□□□□□ -0.35
LITAF-201ENST00000339430 CSMD2Q7Z408 3487 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 P01737 135 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 RASL11AQ6T310 242 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 PRNTQ86SH4 94 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 VAMP8Q9BV40 100 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 SNHG12Q9BXW3 62 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 MRPL27Q9P0M9 148 aaKnown RBP12.85□□□□□ -0.35
LITAF-201ENST00000339430 ABCA12Q86UK0 2595 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 DIRC3C9JPN6 131 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 KRTAP10-9P60411 292 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 Q8N976 141 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 GTSF1Q8WW33 167 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 PGLYRP4Q96LB8 373 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 OTORQ9NRC9 128 aa12.85□□□□□ -0.35
LITAF-201ENST00000339430 GCN1Q92616 2671 aaKnown RBP12.85□□□□□ -0.35
LITAF-201ENST00000339430 ZFHX3Q15911 3703 aa12.84□□□□□ -0.35
LITAF-201ENST00000339430 CEACAM3P40198 252 aa12.84□□□□□ -0.35
LITAF-201ENST00000339430 BCL6BQ8N143 479 aaPredicted RBP12.84□□□□□ -0.35
LITAF-201ENST00000339430 DAZAP1Q96EP5 407 aaKnown RBP12.84□□□□□ -0.35
LITAF-201ENST00000339430 IL4P05112 153 aa12.84□□□□□ -0.35
LITAF-201ENST00000339430 Q86TA4 180 aa12.84□□□□□ -0.35
LITAF-201ENST00000339430 NIT1Q86X76 327 aa12.84□□□□□ -0.35
LITAF-201ENST00000339430 DYNAPQ8N1N2 210 aa12.84□□□□□ -0.35
LITAF-201ENST00000339430 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
LITAF-201ENST00000339430 PSMG3-AS1Q96PY0 264 aa12.84□□□□□ -0.35
LITAF-201ENST00000339430 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.35
LITAF-201ENST00000339430 C19orf71A6NCJ1 209 aa12.83□□□□□ -0.36
LITAF-201ENST00000339430 NCBP2LA6PVI3 153 aaKnown RBP12.83□□□□□ -0.36
LITAF-201ENST00000339430 PRSS22Q9GZN4 317 aa12.83□□□□□ -0.36
LITAF-201ENST00000339430 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
LITAF-201ENST00000339430 A0A1B0GXF2 115 aa12.83□□□□□ -0.36
LITAF-201ENST00000339430 C5orf64Q2M2E5 130 aa12.83□□□□□ -0.36
LITAF-201ENST00000339430 HIST2H2BCQ6DN03 193 aa12.83□□□□□ -0.36
LITAF-201ENST00000339430 ZNF491Q8N8L2 437 aa12.83□□□□□ -0.36
LITAF-201ENST00000339430 NPBQ8NG41 125 aa12.83□□□□□ -0.36
LITAF-201ENST00000339430 SRSF8Q9BRL6 282 aaKnown RBP12.83□□□□□ -0.36
LITAF-201ENST00000339430 A8MWL6 223 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 ODF3BA8MYP8 253 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 NDUFA3O95167 84 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 C3orf79P0CE67 100 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 PRTN3P24158 256 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 FCGR2BP31994 310 aaPredicted RBP12.82□□□□□ -0.36
LITAF-201ENST00000339430 LBHQ53QV2 105 aaPredicted RBP12.82□□□□□ -0.36
LITAF-201ENST00000339430 VMO1Q7Z5L0 202 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 RNF125Q96EQ8 232 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 ALKBH7Q9BT30 221 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms