RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PET117Q6UWS5 81 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 GTSF1Q8WW33 167 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 PRSS22Q9GZN4 317 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 RPP21Q9H633 154 aaKnown RBP15□□□□□ -0.01
PSPC1-201ENST00000338910 K7ERU9 68 aa14.99□□□□□ -0.01
PSPC1-201ENST00000338910 OR5AL1P0C617 328 aa14.99□□□□□ -0.01
PSPC1-201ENST00000338910 DLX1P56177 255 aa14.99□□□□□ -0.01
PSPC1-201ENST00000338910 PRB3Q04118 309 aaPredicted RBP14.99□□□□□ -0.01
PSPC1-201ENST00000338910 C10orf113Q5VZT2 155 aa14.99□□□□□ -0.01
PSPC1-201ENST00000338910 SMIM12Q96EX1 92 aa14.99□□□□□ -0.01
PSPC1-201ENST00000338910 MLST8Q9BVC4 326 aa14.99□□□□□ -0.01
PSPC1-201ENST00000338910 SOX21Q9Y651 276 aaPredicted RBP14.99□□□□□ -0.01
PSPC1-201ENST00000338910 A0A087X0K7 114 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 NDUFS8O00217 210 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 LIPFP07098 398 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 SAA1P0DJI8 122 aaPredicted RBP14.98□□□□□ -0.01
PSPC1-201ENST00000338910 DLX6P56179 175 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 TMEM155Q4W5P6 130 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 LINC00322Q6ZN03 302 aaPredicted RBP14.98□□□□□ -0.01
PSPC1-201ENST00000338910 KLF12Q9Y4X4 402 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 LY6HO94772 140 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 APOA2P02652 100 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 HARBI1Q96MB7 349 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 MAP1LC3CQ9BXW4 147 aa14.98□□□□□ -0.01
PSPC1-201ENST00000338910 PEF1Q9UBV8 284 aaKnown RBP14.98□□□□□ -0.01
PSPC1-201ENST00000338910 A8MWL6 223 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 CT83Q5H943 113 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 OR5AN1Q8NGI8 311 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 OR1L4Q8NGR5 311 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 SGK494Q96LW2 274 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 GPR82Q96P67 336 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 EPDR1Q9UM22 224 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 IGHV1-8P0DP01 117 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 CFAP161Q6P656 301 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 FLYWCH2Q96CP2 140 aaKnown RBP14.97□□□□□ -0.01
PSPC1-201ENST00000338910 MCRIP2Q9BUT9 160 aaKnown RBP14.97□□□□□ -0.01
PSPC1-201ENST00000338910 RALYQ9UKM9 306 aaKnown RBP14.97□□□□□ -0.01
PSPC1-201ENST00000338910 MALRD1Q5VYJ5 2156 aa14.97□□□□□ -0.01
PSPC1-201ENST00000338910 SPTAN1Q13813 2472 aaKnown RBP14.96□□□□□ -0.01
PSPC1-201ENST00000338910 IGLC1P0CG04 106 aa14.96□□□□□ -0.01
PSPC1-201ENST00000338910 NDFIP1Q9BT67 221 aa14.96□□□□□ -0.01
PSPC1-201ENST00000338910 LOC102724200A0A096LPH7 203 aaPredicted RBP14.96□□□□□ -0.01
PSPC1-201ENST00000338910 MOSP00540 346 aa14.96□□□□□ -0.01
PSPC1-201ENST00000338910 GNLYP22749 145 aa14.96□□□□□ -0.01
PSPC1-201ENST00000338910 GPR183P32249 361 aa14.96□□□□□ -0.01
PSPC1-201ENST00000338910 OSR1Q8TAX0 266 aaPredicted RBP14.96□□□□□ -0.01
PSPC1-201ENST00000338910 TMEM186Q96B77 213 aa14.96□□□□□ -0.01
PSPC1-201ENST00000338910 PGLYRP4Q96LB8 373 aa14.96□□□□□ -0.01
PSPC1-201ENST00000338910 C19orf71A6NCJ1 209 aa14.95□□□□□ -0.02
PSPC1-201ENST00000338910 C2orf91Q6ZV80 131 aa14.95□□□□□ -0.02
PSPC1-201ENST00000338910 ZNF430Q9H8G1 570 aaPredicted RBP14.95□□□□□ -0.02
PSPC1-201ENST00000338910 NDUFA4L2Q9NRX3 87 aa14.95□□□□□ -0.02
PSPC1-201ENST00000338910 SLC25A5P05141 298 aaKnown RBP14.95□□□□□ -0.02
PSPC1-201ENST00000338910 LINC01545Q5VT33 79 aa14.95□□□□□ -0.02
PSPC1-201ENST00000338910 COL12A1Q99715 3063 aa14.95□□□□□ -0.02
PSPC1-201ENST00000338910 IGKV1D-37A0A075B6S9 117 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 TCRBV4S1A1TA0A5B7 111 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 PDPNQ86YL7 162 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 LINC00311Q8N616 119 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 GFRA4Q9GZZ7 299 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 FNDC4Q9H6D8 234 aaPredicted RBP14.94□□□□□ -0.02
PSPC1-201ENST00000338910 ZNF492Q9P255 531 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 HSPB8Q9UJY1 196 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 C7orf71A4D174 169 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 P01737 135 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 COX8AP10176 69 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 ZNF137PP52743 207 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 ZNF138P52744 262 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 FOXE3Q13461 319 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 RBPMS2Q6ZRY4 209 aaKnown RBP14.94□□□□□ -0.02
PSPC1-201ENST00000338910 OR4C13Q8NGP0 309 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 TMEM133Q9H2Q1 129 aa14.94□□□□□ -0.02
PSPC1-201ENST00000338910 IGHV3-72A0A0B4J1Y9 119 aa14.93□□□□□ -0.02
PSPC1-201ENST00000338910 ERHP84090 104 aaKnown RBP14.93□□□□□ -0.02
PSPC1-201ENST00000338910 TMEM177Q53S58 311 aa14.93□□□□□ -0.02
PSPC1-201ENST00000338910 NPIPB3Q92617 1050 aa14.93□□□□□ -0.02
PSPC1-201ENST00000338910 PGPA6NDG6 321 aa14.93□□□□□ -0.02
PSPC1-201ENST00000338910 S100A7P31151 101 aa14.93□□□□□ -0.02
PSPC1-201ENST00000338910 LINC00305Q7Z4B0 112 aa14.93□□□□□ -0.02
PSPC1-201ENST00000338910 C8orf31Q8N9H6 132 aa14.93□□□□□ -0.02
PSPC1-201ENST00000338910 MEGF9Q9H1U4 602 aa14.93□□□□□ -0.02
PSPC1-201ENST00000338910 TMEM8BA6NDV4 472 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 E7EUB6 86 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 INS-IGF2F8WCM5 200 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 H0Y8G0 127 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 LTAP01374 205 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 RITA1Q96K30 269 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 PMCHL2Q9BQD1 86 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 ENSAO43768 121 aaKnown RBP14.92□□□□□ -0.02
PSPC1-201ENST00000338910 ARF6P62330 175 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 SEC11AP67812 179 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 TMEM95Q3KNT9 176 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 UFSP1Q6NVU6 142 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 BLNKQ8WV28 456 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 ZC2HC1AQ96GY0 325 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 CACNA1BQ00975 2339 aa14.92□□□□□ -0.02
PSPC1-201ENST00000338910 ASH1LQ9NR48 2969 aaKnown RBP14.91□□□□□ -0.02
PSPC1-201ENST00000338910 SAP30O75446 220 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 THAP8Q8NA92 274 aa14.91□□□□□ -0.02
PSPC1-201ENST00000338910 STXBP6Q8NFX7 210 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms